Clostridium sp. AM45-5

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM45-5 is characterized by having a single replicon, which suggests a streamlined genomic architecture. The strain is cataloged under the accession number QUIE00000000.1, indicating its availability for further study and analysis in microbial databases. As a member of the Clostridium genus, this strain is likely to exhibit anaerobic metabolic processes, typical of many Clostridia, which can be involved in various ecological niches, particularly in anaerobic environments such as sediments and the intestines of animals. The presence of a single replicon may also suggest a certain level of genetic stability, which can be important for understanding its ecological role and potential applications in biotechnology or microbiome studies. The unique traits of Clostridium sp. AM45-5 highlight its potential significance in ecological interactions, particularly in nutrient cycling within anaerobic habitats. Its characteristics might play a role in processes such as fermentation or biodegradation, contributing to the overall microbial diversity and functionality of its environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM45-5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM45-5 AM45-5.Scaf109, whole genome shotgun

Gene Summary

Adenine Count

959288 bp

Thymine Count

934707 bp

Guanine Count

904410 bp

Cytosine Count

865283 bp

Genome Length

3664442 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor histidine kinaseDW954_12395Not AvailableNegative2485288 - 248701564537.1
hypothetical proteinDW954_12400Not AvailableNegative2487077 - 248739411590.7
extracellular solute-binding proteinDW954_12405Not AvailableNegative2487352 - 248804425596.3
transcription termination factor rhoDW954_12410Not AvailableNegative2488290 - 248887021998.9
polysaccharide deacetylaseDW954_12420Not AvailableNegative2490520 - 249130830171.2
transcriptional regulatorDW954_12425Not AvailablePositive2492028 - 249271125762.8
lysr family transcriptional regulatorDW954_12435Not AvailablePositive2494543 - 249549936589.0
fumarylacetoacetate hydrolase family proteinDW954_12440Not AvailablePositive2495838 - 249676733536.1
sdr family nad(p)-dependent oxidoreductaseDW954_12445Not AvailablePositive2496992 - 249778628638.8
paai family thioesteraseDW954_12455Not AvailableNegative2499195 - 249961715598.7

Displaying genes 2161 – 2170 of 3160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.