Clostridium sp. AM45-5

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM45-5 is characterized by having a single replicon, which suggests a streamlined genomic architecture. The strain is cataloged under the accession number QUIE00000000.1, indicating its availability for further study and analysis in microbial databases. As a member of the Clostridium genus, this strain is likely to exhibit anaerobic metabolic processes, typical of many Clostridia, which can be involved in various ecological niches, particularly in anaerobic environments such as sediments and the intestines of animals. The presence of a single replicon may also suggest a certain level of genetic stability, which can be important for understanding its ecological role and potential applications in biotechnology or microbiome studies. The unique traits of Clostridium sp. AM45-5 highlight its potential significance in ecological interactions, particularly in nutrient cycling within anaerobic habitats. Its characteristics might play a role in processes such as fermentation or biodegradation, contributing to the overall microbial diversity and functionality of its environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM45-5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM45-5 AM45-5.Scaf109, whole genome shotgun

Gene Summary

Adenine Count

959288 bp

Thymine Count

934707 bp

Guanine Count

904410 bp

Cytosine Count

865283 bp

Genome Length

3664442 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium:glutamate symporterDW954_00725Not AvailableNegative159773 - 16102344083.0
response regulatorDW954_00730Not AvailableNegative161357 - 16204325863.0
ghkl domain-containing proteinDW954_00735Not AvailableNegative162031 - 16365359555.5
type i glyceraldehyde-3-phosphate dehydrogenaseDW954_00740Not AvailablePositive164278 - 16529736301.2
phosphoglycerate kinaseDW954_00745Not AvailablePositive165394 - 16661742880.4
triose-phosphate isomeraseDW954_00750Not AvailablePositive166896 - 16764527000.4
degv family proteinDW954_00755Not AvailablePositive167973 - 16885732386.2
dna-binding proteinDW954_00760Not AvailablePositive169012 - 16943715673.8
rsmb/nop family class i sam-dependent rna methyltransferaseDW954_00765Not AvailablePositive169529 - 17043433243.4
mate family efflux transporterDW954_00770Not AvailableNegative170483 - 17186249939.0

Displaying genes 171 – 180 of 3160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.