Clostridium sp. AM45-5

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM45-5 is characterized by having a single replicon, which suggests a streamlined genomic architecture. The strain is cataloged under the accession number QUIE00000000.1, indicating its availability for further study and analysis in microbial databases. As a member of the Clostridium genus, this strain is likely to exhibit anaerobic metabolic processes, typical of many Clostridia, which can be involved in various ecological niches, particularly in anaerobic environments such as sediments and the intestines of animals. The presence of a single replicon may also suggest a certain level of genetic stability, which can be important for understanding its ecological role and potential applications in biotechnology or microbiome studies. The unique traits of Clostridium sp. AM45-5 highlight its potential significance in ecological interactions, particularly in nutrient cycling within anaerobic habitats. Its characteristics might play a role in processes such as fermentation or biodegradation, contributing to the overall microbial diversity and functionality of its environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM45-5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM45-5 AM45-5.Scaf109, whole genome shotgun

Gene Summary

Adenine Count

959288 bp

Thymine Count

934707 bp

Guanine Count

904410 bp

Cytosine Count

865283 bp

Genome Length

3664442 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4446 family proteinDW954_08230Not AvailablePositive1652084 - 165288730590.4
duf3881 family proteinDW954_08235Not AvailablePositive1652893 - 165375932968.6
Trna-argNot AvailableNot AvailablePositive1654329 - 1654405Not Available
site-specific integraseDW954_08245Not AvailableNegative1654752 - 165614352687.1
dna-binding proteinDW954_08250Not AvailableNegative1656121 - 165655817004.6
dna-binding proteinDW954_08255Not AvailableNegative1656663 - 16568908739.22
type ii toxin-antitoxin system pemk/mazf family toxinDW954_08260Not AvailableNegative1656921 - 165730114448.6
hypothetical proteinDW954_08265Not AvailableNegative1657553 - 16577507740.28
sigma-70 family rna polymerase sigma factorDW954_08270Not AvailableNegative1657789 - 165833721533.4
hypothetical proteinDW954_08275Not AvailableNegative1658638 - 165917421075.4

Displaying genes 1491 – 1500 of 3160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.