Clostridium sp. AM46-21

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM46-21 is characterized by having a single replicon, indicating a streamlined genomic structure that may play a role in its metabolic efficiency and adaptability. The organism is cataloged under the accession number QUIB00000000.1, which serves as a reference for genomic information related to this particular strain. Clostridium species are typically known for their anaerobic metabolism and ability to produce spores, which allows them to survive in various environmental conditions. While specific details about the metabolic pathways or ecological roles of Clostridium sp. AM46-21 are not available, the traits of the genus suggest that it may contribute to important biogeochemical cycles, particularly in anaerobic environments. The presence of a single replicon in Clostridium sp. AM46-21 could indicate a potential for efficient genetic regulation and resource allocation, possibly enhancing its survival and competitive abilities in niche environments. This trait may also reflect evolutionary adaptations to specific ecological niches where this strain is found. Thus, the genomic organization of Clostridium sp. AM46-21 may provide insights into its ecological roles and interactions within microbial communities, particularly in anaerobic habitats. Further investigation into its specific metabolic capabilities and ecological contributions would be beneficial to fully understand its impact within its environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM46-21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM46-21 AM46-21.Scaf33, whole genome shotgun

Gene Summary

Adenine Count

888507 bp

Thymine Count

858011 bp

Guanine Count

636885 bp

Cytosine Count

592501 bp

Genome Length

2976561 bp

Protein-coding Genes

2465 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxaloacetate decarboxylase subunit alphaDW959_01110Not AvailablePositive234732 - 23613852585.6
potassium transporter ktrbDW959_01115Not AvailablePositive236308 - 23769050564.4
trka family potassium uptake proteinDW959_01120Not AvailablePositive237683 - 23834824324.6
nad(p)/fad-dependent oxidoreductaseDW959_01125Not AvailablePositive238345 - 23959245975.7
(d)cmp kinaseDW959_01130Not AvailablePositive239622 - 24027523508.2
bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30s ribosomal protein s1DW959_01135Not AvailablePositive240296 - 24224872585.6
alpha/beta hydrolaseDW959_01140Not AvailableNegative242772 - 24367133535.1
hypothetical proteinDW959_01145Not AvailableNegative243899 - 24462427566.7
hypothetical proteinDW959_01150Not AvailableNegative244617 - 24590049712.7
arginine--trna ligaseDW959_01155Not AvailableNegative245916 - 24760763814.1

Displaying genes 251 – 260 of 2545 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.