Ruminococcus sp. AF14-5

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF14-5 is a Gram-positive bacterium characterized by its cocci shape. One notable feature of this species is the presence of flagella, which may assist in motility and colonization within its environment. Ruminococcus sp. AF14-5 has a single replicon, indicating a streamlined genomic architecture that could play a role in its adaptability and efficiency in various ecological niches. The accession number for Ruminococcus sp. AF14-5 is QUHI00000000.1, which provides a unique identifier for researchers interested in studying its genetic and functional properties. While specific metabolic pathways or ecological roles are not detailed, the presence of Ruminococcus species in the gut microbiome is often associated with the fermentation of complex carbohydrates. This suggests a potential role in the digestion of plant materials, contributing to nutrient cycling and energy availability in its ecosystem. In summary, Ruminococcus sp. AF14-5, with its Gram-positive cocci morphology and flagella presence, may play a significant role in microbial communities, particularly in the context of gut health and carbohydrate metabolism. Its single replicon could enhance its adaptability, highlighting the importance of such microorganisms in ecological dynamics and nutrient processing.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF14-5
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF14-5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF14-5 AF14-5.Scaf296, whole genome shotgun

Gene Summary

Adenine Count

1304889 bp

Thymine Count

1298561 bp

Guanine Count

915600 bp

Cytosine Count

911519 bp

Genome Length

4432040 bp

Protein-coding Genes

3877 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseDWW20_10080Not AvailableNegative2208638 - 221108290599.1
abc transporter atp-binding proteinDWW20_10085Not AvailableNegative2211079 - 221175324667.9
sensor histidine kinaseDWW20_10090Not AvailableNegative2211931 - 221319648494.9
dna-binding response regulatorDWW20_10095Not AvailableNegative2213172 - 221386126181.7
trna (uracil-5-)-methyltransferaseDWW20_10100Not AvailableNegative2213882 - 22141249062.78
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdDWW20_10105Not AvailableNegative2214151 - 221553051472.1
hypothetical proteinDWW20_10110Not AvailableNegative2215597 - 22158188497.72
noncanonical pyrimidine nucleotidase, yjjg familyDWW20_10115Not AvailablePositive2216107 - 221679026027.1
dna helicase pcraDWW20_10120Not AvailableNegative2216924 - 221915885045.6
duf1836 domain-containing proteinDWW20_10125Not AvailablePositive2219452 - 222006924349.6

Displaying genes 1951 – 1960 of 3945 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.