Ruminococcus sp. AF14-5

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF14-5 is a Gram-positive bacterium characterized by its cocci shape. One notable feature of this species is the presence of flagella, which may assist in motility and colonization within its environment. Ruminococcus sp. AF14-5 has a single replicon, indicating a streamlined genomic architecture that could play a role in its adaptability and efficiency in various ecological niches. The accession number for Ruminococcus sp. AF14-5 is QUHI00000000.1, which provides a unique identifier for researchers interested in studying its genetic and functional properties. While specific metabolic pathways or ecological roles are not detailed, the presence of Ruminococcus species in the gut microbiome is often associated with the fermentation of complex carbohydrates. This suggests a potential role in the digestion of plant materials, contributing to nutrient cycling and energy availability in its ecosystem. In summary, Ruminococcus sp. AF14-5, with its Gram-positive cocci morphology and flagella presence, may play a significant role in microbial communities, particularly in the context of gut health and carbohydrate metabolism. Its single replicon could enhance its adaptability, highlighting the importance of such microorganisms in ecological dynamics and nutrient processing.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF14-5
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF14-5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF14-5 AF14-5.Scaf296, whole genome shotgun

Gene Summary

Adenine Count

1304889 bp

Thymine Count

1298561 bp

Guanine Count

915600 bp

Cytosine Count

911519 bp

Genome Length

4432040 bp

Protein-coding Genes

3877 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sseb family proteinDWW20_09515Not AvailablePositive2075900 - 207632815892.0
mate family efflux transporterDWW20_09520Not AvailableNegative2076447 - 207781449631.4
ferritin-like domain-containing proteinDWW20_09525Not AvailablePositive2078092 - 207855017331.3
laci family transcriptional regulatorDWW20_09530Not AvailablePositive2079308 - 208028836856.8
sugar abc transporter substrate-binding proteinDWW20_09535Not AvailablePositive2080680 - 208190943933.5
sugar abc transporter permeaseDWW20_09540Not AvailablePositive2082089 - 208296732423.1
carbohydrate abc transporter permeaseDWW20_09545Not AvailablePositive2083018 - 208384829937.9
glycoside hydrolase family 32 proteinDWW20_09550Not AvailablePositive2083867 - 208534857014.6
right-handed parallel beta-helix repeat-containing proteinDWW20_09555Not AvailablePositive2085414 - 208675149528.4
merr family transcriptional regulatorDWW20_09560Not AvailableNegative2086830 - 208747725295.7

Displaying genes 1841 – 1850 of 3945 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.