Ruminococcus sp. AF14-5

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF14-5 is a Gram-positive bacterium characterized by its cocci shape. One notable feature of this species is the presence of flagella, which may assist in motility and colonization within its environment. Ruminococcus sp. AF14-5 has a single replicon, indicating a streamlined genomic architecture that could play a role in its adaptability and efficiency in various ecological niches. The accession number for Ruminococcus sp. AF14-5 is QUHI00000000.1, which provides a unique identifier for researchers interested in studying its genetic and functional properties. While specific metabolic pathways or ecological roles are not detailed, the presence of Ruminococcus species in the gut microbiome is often associated with the fermentation of complex carbohydrates. This suggests a potential role in the digestion of plant materials, contributing to nutrient cycling and energy availability in its ecosystem. In summary, Ruminococcus sp. AF14-5, with its Gram-positive cocci morphology and flagella presence, may play a significant role in microbial communities, particularly in the context of gut health and carbohydrate metabolism. Its single replicon could enhance its adaptability, highlighting the importance of such microorganisms in ecological dynamics and nutrient processing.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF14-5
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF14-5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF14-5 AF14-5.Scaf296, whole genome shotgun

Gene Summary

Adenine Count

1304889 bp

Thymine Count

1298561 bp

Guanine Count

915600 bp

Cytosine Count

911519 bp

Genome Length

4432040 bp

Protein-coding Genes

3877 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydroxy-acid dehydrataseDWW20_09355Not AvailablePositive2039075 - 204074858938.9
biosynthetic-type acetolactate synthase large subunitDWW20_09360Not AvailablePositive2040824 - 204251560987.4
3-phosphoserine/phosphohydroxythreonine transaminaseDWW20_09365Not AvailablePositive2042499 - 204358140201.6
3-phosphoglycerate dehydrogenaseDWW20_09370Not AvailablePositive2043581 - 204474442112.9
hypothetical proteinDWW20_09375Not AvailableNegative2044829 - 204524515858.2
hypothetical proteinDWW20_09380Not AvailablePositive2045509 - 204632430845.9
dna-binding response regulatorDWW20_09385Not AvailablePositive2046394 - 204708325814.3
sensor histidine kinaseDWW20_09390Not AvailablePositive2047052 - 204823644572.4
proton-coupled thiamine transporter yuajDWW20_09400Not AvailablePositive2049102 - 204976724065.2
8-oxo-dgtp diphosphataseDWW20_09405Not AvailablePositive2049852 - 205031317589.1

Displaying genes 1811 – 1820 of 3945 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.