Roseburia sp. AF15-21

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF15-21 is characterized as a rod-shaped bacterium. This species possesses one flagellum, which may contribute to its motility in various environments. Genomic analysis reveals that Roseburia sp. AF15-21 contains a single replicon, indicating a streamlined genetic structure that could be advantageous for its survival and adaptation. The accession number for this strain is QUHG00000000.1, which facilitates its identification and classification within microbial databases. The presence of a single replicon suggests a potential for efficient replication and stability in its genetic material. In ecological terms, Roseburia species are often associated with the human gut microbiota, where they play a significant role in the fermentation of dietary fibers. This fermentation process can lead to the production of short-chain fatty acids, which are beneficial to host health. The ability of Roseburia sp. AF15-21 to move through various environments, aided by its flagellum, may enhance its capacity to colonize niches within the gut, thereby influencing the overall microbial community composition and metabolic functions. In summary, Roseburia sp. AF15-21 is a rod-shaped bacterium with a single flagellum and one replicon, identifiable by the accession number QUHG00000000.1. Its motility and genetic attributes suggest potential ecological roles in gut health and fiber fermentation, contributing to the complex interactions within the microbiome.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF15-21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF15-21 AF15-21.Scaf33, whole genome shotgun

Gene Summary

Adenine Count

972176 bp

Thymine Count

909446 bp

Guanine Count

687407 bp

Cytosine Count

615360 bp

Genome Length

3184543 bp

Protein-coding Genes

2957 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar hook-basal body complex protein flieDWW33_02400Not AvailableNegative489082 - 48939311364.2
flagellar basal body rod protein flgcDWW33_02405Not AvailableNegative489421 - 48986416069.5
flagellar basal body rod protein flgbDWW33_02410Not AvailableNegative489887 - 49027614648.9
gtp-sensing pleiotropic transcriptional regulator codyDWW33_02415Not AvailableNegative490503 - 49127628594.4
type i dna topoisomeraseDWW33_02420Not AvailableNegative491368 - 49345878695.0
dna-protecting protein dpraDWW33_02425Not AvailableNegative493493 - 49458740535.2
atp-binding proteinDWW33_02430Not AvailableNegative494593 - 49613157849.7
rna polymerase sporulation sigma factor sigkDWW33_02435Not AvailableNegative496351 - 49698624687.0
rlua family pseudouridine synthaseDWW33_02440Not AvailablePositive497106 - 49807436828.4
tryptophan--trna ligaseDWW33_02445Not AvailableNegative498071 - 49907537619.2

Displaying genes 481 – 490 of 3009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.