Roseburia sp. AF15-21

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF15-21 is characterized as a rod-shaped bacterium. This species possesses one flagellum, which may contribute to its motility in various environments. Genomic analysis reveals that Roseburia sp. AF15-21 contains a single replicon, indicating a streamlined genetic structure that could be advantageous for its survival and adaptation. The accession number for this strain is QUHG00000000.1, which facilitates its identification and classification within microbial databases. The presence of a single replicon suggests a potential for efficient replication and stability in its genetic material. In ecological terms, Roseburia species are often associated with the human gut microbiota, where they play a significant role in the fermentation of dietary fibers. This fermentation process can lead to the production of short-chain fatty acids, which are beneficial to host health. The ability of Roseburia sp. AF15-21 to move through various environments, aided by its flagellum, may enhance its capacity to colonize niches within the gut, thereby influencing the overall microbial community composition and metabolic functions. In summary, Roseburia sp. AF15-21 is a rod-shaped bacterium with a single flagellum and one replicon, identifiable by the accession number QUHG00000000.1. Its motility and genetic attributes suggest potential ecological roles in gut health and fiber fermentation, contributing to the complex interactions within the microbiome.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF15-21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF15-21 AF15-21.Scaf33, whole genome shotgun

Gene Summary

Adenine Count

972176 bp

Thymine Count

909446 bp

Guanine Count

687407 bp

Cytosine Count

615360 bp

Genome Length

3184543 bp

Protein-coding Genes

2957 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trk family potassium uptake proteinDWW33_14710Not AvailableNegative3041701 - 304304448713.8
hypothetical proteinDWW33_14715Not AvailablePositive3043261 - 304378820485.4
duf1653 domain-containing proteinDWW33_14720Not AvailablePositive3043818 - 304437221443.3
cyth domain-containing proteinDWW33_14725Not AvailableNegative3044365 - 304482017611.1
dj-1/pfpi family proteinDWW33_14730Not AvailablePositive3045000 - 304555119159.4
small acid-soluble spore proteinDWW33_14735Not AvailablePositive3045676 - 30458917740.25
trigger factorDWW33_14740Not AvailablePositive3046137 - 304748050253.4
atp-dependent clp endopeptidase proteolytic subunit clppDWW33_14745Not AvailablePositive3047596 - 304817720978.2
atp-dependent clp protease atp-binding subunit clpxDWW33_14750Not AvailablePositive3048307 - 304956046515.9
endopeptidase laDWW33_14755Not AvailablePositive3049577 - 305190487165.3

Displaying genes 2861 – 2870 of 3009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.