Roseburia sp. AF15-21

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF15-21 is characterized as a rod-shaped bacterium. This species possesses one flagellum, which may contribute to its motility in various environments. Genomic analysis reveals that Roseburia sp. AF15-21 contains a single replicon, indicating a streamlined genetic structure that could be advantageous for its survival and adaptation. The accession number for this strain is QUHG00000000.1, which facilitates its identification and classification within microbial databases. The presence of a single replicon suggests a potential for efficient replication and stability in its genetic material. In ecological terms, Roseburia species are often associated with the human gut microbiota, where they play a significant role in the fermentation of dietary fibers. This fermentation process can lead to the production of short-chain fatty acids, which are beneficial to host health. The ability of Roseburia sp. AF15-21 to move through various environments, aided by its flagellum, may enhance its capacity to colonize niches within the gut, thereby influencing the overall microbial community composition and metabolic functions. In summary, Roseburia sp. AF15-21 is a rod-shaped bacterium with a single flagellum and one replicon, identifiable by the accession number QUHG00000000.1. Its motility and genetic attributes suggest potential ecological roles in gut health and fiber fermentation, contributing to the complex interactions within the microbiome.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF15-21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF15-21 AF15-21.Scaf33, whole genome shotgun

Gene Summary

Adenine Count

972176 bp

Thymine Count

909446 bp

Guanine Count

687407 bp

Cytosine Count

615360 bp

Genome Length

3184543 bp

Protein-coding Genes

2957 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rpn family recombination-promoting nuclease/putative transposaseDWW33_14095Not AvailablePositive2937358 - 293822133238.6
gntr family transcriptional regulatorDWW33_14100Not AvailableNegative2938415 - 293873511831.3
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeDWW33_14105Not AvailableNegative2938815 - 293949524761.1
dna metabolism proteinDWW33_14110Not AvailableNegative2939588 - 294037930062.8
putative dna modification/repair radical sam proteinDWW33_14115Not AvailableNegative2940427 - 294174049512.8
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaDWW33_14120Not AvailablePositive2942313 - 294318532620.6
spoiid/lytb domain-containing proteinDWW33_14125Not AvailablePositive2943247 - 294413733321.4
m23 family peptidaseDWW33_14130Not AvailablePositive2944210 - 294504029696.1
ggdef domain-containing proteinDWW33_14135Not AvailablePositive2945120 - 294672163030.6
giy-yig nuclease family proteinDWW33_14140Not AvailablePositive2946887 - 294715610370.5

Displaying genes 2741 – 2750 of 3009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.