Roseburia sp. AF15-21

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF15-21 is characterized as a rod-shaped bacterium. This species possesses one flagellum, which may contribute to its motility in various environments. Genomic analysis reveals that Roseburia sp. AF15-21 contains a single replicon, indicating a streamlined genetic structure that could be advantageous for its survival and adaptation. The accession number for this strain is QUHG00000000.1, which facilitates its identification and classification within microbial databases. The presence of a single replicon suggests a potential for efficient replication and stability in its genetic material. In ecological terms, Roseburia species are often associated with the human gut microbiota, where they play a significant role in the fermentation of dietary fibers. This fermentation process can lead to the production of short-chain fatty acids, which are beneficial to host health. The ability of Roseburia sp. AF15-21 to move through various environments, aided by its flagellum, may enhance its capacity to colonize niches within the gut, thereby influencing the overall microbial community composition and metabolic functions. In summary, Roseburia sp. AF15-21 is a rod-shaped bacterium with a single flagellum and one replicon, identifiable by the accession number QUHG00000000.1. Its motility and genetic attributes suggest potential ecological roles in gut health and fiber fermentation, contributing to the complex interactions within the microbiome.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF15-21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF15-21 AF15-21.Scaf33, whole genome shotgun

Gene Summary

Adenine Count

972176 bp

Thymine Count

909446 bp

Guanine Count

687407 bp

Cytosine Count

615360 bp

Genome Length

3184543 bp

Protein-coding Genes

2957 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine--trna ligase subunit betaDWW33_12810Not AvailablePositive2692460 - 269293017331.8
group ii intron reverse transcriptase/maturaseDWW33_12820Not AvailablePositive2693688 - 269498650930.7
xre family transcriptional regulatorDWW33_12825Not AvailablePositive2695185 - 269570019204.7
hypothetical proteinDWW33_12830Not AvailablePositive2695897 - 26960857024.4
atp-binding cassette domain-containing proteinDWW33_12835Not AvailablePositive2696164 - 269687726106.2
lantibiotic immunity abc transporter mute/epie family permease subunitDWW33_12840Not AvailablePositive2696870 - 269760127642.2
lantibiotic immunity abc transporter mutg family permease subunitDWW33_12845Not AvailablePositive2697603 - 269836127758.6
dna-binding response regulatorDWW33_12850Not AvailablePositive2698376 - 269903825319.9
sensor histidine kinaseDWW33_12855Not AvailablePositive2699026 - 270040251899.2
fic family proteinDWW33_12860Not AvailablePositive2700880 - 270181535158.3

Displaying genes 2501 – 2510 of 3009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.