Parabacteroides sp. AF17-28

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF17-28 is characterized by its rod shape and the presence of flagella, which suggests that it may possess motility capabilities. This morphological feature is significant as it can influence the bacterium's ability to navigate through various environments, potentially impacting its ecological interactions and survival strategies. The genome of Parabacteroides sp. AF17-28 is represented by a single replicon, indicating a streamlined genetic architecture that could facilitate efficient replication and maintenance of genetic material. This trait may contribute to the bacterium's adaptability in its habitat. The accession number for Parabacteroides sp. AF17-28 is QUGV00000000.1, which serves as a reference point for researchers seeking to study its genetic and functional characteristics further. In summary, the combination of its rod shape, flagella presence, and singular replicon suggests that Parabacteroides sp. AF17-28 is well-adapted for motility and potentially advantageous interactions within its environment, which may include nutrient acquisition and competition with other microorganisms. Understanding these traits may provide insights into the ecological roles of Parabacteroides species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF17-28
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF17-28 AF17-28.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

1360416 bp

Thymine Count

1370464 bp

Guanine Count

1165818 bp

Cytosine Count

1158847 bp

Genome Length

5056073 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDWW90_03165Not AvailablePositive805928 - 8061528457.38
Trna-serNot AvailableNot AvailablePositive806238 - 806325Not Available
thioredoxinDWW90_03175Not AvailablePositive806522 - 80699217519.4
30s ribosomal protein s16DWW90_03180Not AvailableNegative807135 - 80768619932.5
1,4-beta-xylanaseDWW90_03185Not AvailablePositive807838 - 80877935627.1
class c beta-lactamase-related serine hydrolaseDWW90_03190Not AvailableNegative808789 - 81004848025.4
ragb/susd family nutrient uptake outer membrane proteinDWW90_03195Not AvailableNegative810897 - 81288574220.1
tonb-dependent receptorDWW90_03200Not AvailableNegative812899 - 816135119963.0
tonb-dependent receptorDWW90_03205Not AvailablePositive816766 - 819990119593.0
ragb/susd family nutrient uptake outer membrane proteinDWW90_03210Not AvailablePositive820003 - 82202475840.4

Displaying genes 641 – 650 of 3983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.