Parabacteroides sp. AF17-28

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF17-28 is characterized by its rod shape and the presence of flagella, which suggests that it may possess motility capabilities. This morphological feature is significant as it can influence the bacterium's ability to navigate through various environments, potentially impacting its ecological interactions and survival strategies. The genome of Parabacteroides sp. AF17-28 is represented by a single replicon, indicating a streamlined genetic architecture that could facilitate efficient replication and maintenance of genetic material. This trait may contribute to the bacterium's adaptability in its habitat. The accession number for Parabacteroides sp. AF17-28 is QUGV00000000.1, which serves as a reference point for researchers seeking to study its genetic and functional characteristics further. In summary, the combination of its rod shape, flagella presence, and singular replicon suggests that Parabacteroides sp. AF17-28 is well-adapted for motility and potentially advantageous interactions within its environment, which may include nutrient acquisition and competition with other microorganisms. Understanding these traits may provide insights into the ecological roles of Parabacteroides species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF17-28
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF17-28 AF17-28.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

1360416 bp

Thymine Count

1370464 bp

Guanine Count

1165818 bp

Cytosine Count

1158847 bp

Genome Length

5056073 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinDWW90_15555Not AvailablePositive3876173 - 387788863906.7
glycoside hydrolase family 16 proteinDWW90_15560Not AvailablePositive3877957 - 387876030481.7
beta-glucosidase bglxDWW90_15565Not AvailablePositive3878764 - 388100781267.5
glycoside hydrolase family 5 proteinDWW90_15570Not AvailablePositive3881024 - 388228048264.3
glycosyl hydrolaseDWW90_15575Not AvailablePositive3882285 - 388452582717.1
potassium/proton antiporterDWW90_15580Not AvailableNegative3884738 - 388625555117.6
transglutaminase domain-containing proteinDWW90_15585Not AvailablePositive3886315 - 3889059102486.0
type ii toxin-antitoxin system rele/pare family toxinDWW90_15590Not AvailableNegative3889147 - 388945811847.2
hypothetical proteinDWW90_15595Not AvailableNegative3889449 - 388980813643.1
hypothetical proteinDWW90_15600Not AvailablePositive3889928 - 389019110018.0

Displaying genes 3061 – 3070 of 3983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.