Parabacteroides sp. AF17-28

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF17-28 is characterized by its rod shape and the presence of flagella, which suggests that it may possess motility capabilities. This morphological feature is significant as it can influence the bacterium's ability to navigate through various environments, potentially impacting its ecological interactions and survival strategies. The genome of Parabacteroides sp. AF17-28 is represented by a single replicon, indicating a streamlined genetic architecture that could facilitate efficient replication and maintenance of genetic material. This trait may contribute to the bacterium's adaptability in its habitat. The accession number for Parabacteroides sp. AF17-28 is QUGV00000000.1, which serves as a reference point for researchers seeking to study its genetic and functional characteristics further. In summary, the combination of its rod shape, flagella presence, and singular replicon suggests that Parabacteroides sp. AF17-28 is well-adapted for motility and potentially advantageous interactions within its environment, which may include nutrient acquisition and competition with other microorganisms. Understanding these traits may provide insights into the ecological roles of Parabacteroides species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF17-28
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF17-28 AF17-28.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

1360416 bp

Thymine Count

1370464 bp

Guanine Count

1165818 bp

Cytosine Count

1158847 bp

Genome Length

5056073 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2975 domain-containing proteinDWW90_11200Not AvailablePositive2740550 - 274119123850.3
cpbp family intramembrane metalloproteaseDWW90_11205Not AvailablePositive2741203 - 274200329862.4
cpbp family intramembrane metalloproteaseDWW90_11210Not AvailablePositive2742009 - 274283630829.6
transcriptional regulatorDWW90_11215Not AvailablePositive2742840 - 27430527662.52
duf3836 domain-containing proteinDWW90_11220Not AvailablePositive2743241 - 274365115744.6
dna damage-inducible protein dDWW90_11225Not AvailablePositive2743811 - 274467432647.1
trpb-like pyridoxal phosphate-dependent enzymeDWW90_11230Not AvailableNegative2744796 - 274616050084.1
hypothetical proteinDWW90_11235Not AvailablePositive2746316 - 274753945504.1
eama family transporterDWW90_11240Not AvailablePositive2747539 - 274841132364.4
pas domain s-box proteinDWW90_11245Not AvailableNegative2748389 - 275055182569.9

Displaying genes 2221 – 2230 of 3983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.