Parabacteroides sp. AF17-28

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF17-28 is characterized by its rod shape and the presence of flagella, which suggests that it may possess motility capabilities. This morphological feature is significant as it can influence the bacterium's ability to navigate through various environments, potentially impacting its ecological interactions and survival strategies. The genome of Parabacteroides sp. AF17-28 is represented by a single replicon, indicating a streamlined genetic architecture that could facilitate efficient replication and maintenance of genetic material. This trait may contribute to the bacterium's adaptability in its habitat. The accession number for Parabacteroides sp. AF17-28 is QUGV00000000.1, which serves as a reference point for researchers seeking to study its genetic and functional characteristics further. In summary, the combination of its rod shape, flagella presence, and singular replicon suggests that Parabacteroides sp. AF17-28 is well-adapted for motility and potentially advantageous interactions within its environment, which may include nutrient acquisition and competition with other microorganisms. Understanding these traits may provide insights into the ecological roles of Parabacteroides species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF17-28
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF17-28 AF17-28.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

1360416 bp

Thymine Count

1370464 bp

Guanine Count

1165818 bp

Cytosine Count

1158847 bp

Genome Length

5056073 bp

Protein-coding Genes

3898 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1080 domain-containing proteinDWW90_08640Not AvailablePositive2134582 - 213532228009.4
malate dehydrogenaseDWW90_08645Not AvailableNegative2135448 - 213638932896.2
class i sam-dependent rrna methyltransferaseDWW90_08650Not AvailableNegative2136536 - 213772044075.9
3'-5' exonuclease domain-containing protein 2DWW90_08655Not AvailableNegative2137721 - 213830222281.8
duf5063 domain-containing proteinDWW90_08660Not AvailableNegative2138299 - 213884720777.2
aaa family atpaseDWW90_08665Not AvailablePositive2139051 - 214061660634.3
dna translocase ftskDWW90_08670Not AvailablePositive2140666 - 214315592627.7
hypothetical proteinDWW90_08675Not AvailablePositive2143526 - 214419124460.2
thioredoxin-disulfide reductaseDWW90_08680Not AvailablePositive2144228 - 214518133874.5
glycerophosphodiester phosphodiesteraseDWW90_08685Not AvailablePositive2145392 - 214616829530.7

Displaying genes 1721 – 1730 of 3983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.