Clostridium sp. AF18-27

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF18-27 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait can be significant for its replication and gene expression efficiency. The organism is cataloged under the accession number QUGT00000000.1, which provides a reference point for researchers interested in its genomic characteristics and potential applications. As a member of the Clostridium genus, it may share common metabolic pathways and ecological roles with other species within this group. Clostridia are generally known for their ability to thrive in anaerobic environments and their involvement in various biogeochemical cycles, particularly in the degradation of organic matter. The single replicon configuration could suggest that Clostridium sp. AF18-27 has adapted to its niche in a manner that optimizes its survival and function. This adaptation may allow for efficient resource utilization in its environment, potentially influencing microbial community dynamics. Understanding the specific traits and behaviors of this strain can contribute to a broader comprehension of clostridial ecology, particularly in anaerobic habitats where they play critical roles in nutrient cycling and energy flow. Overall, the distinct genomic feature of a single replicon in Clostridium sp. AF18-27 may offer insights into its ecological strategies and functional capabilities within its ecosystem.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF18-27
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF18-27 AF18-27.Scaf53, whole genome shotgun

Gene Summary

Adenine Count

1440605 bp

Thymine Count

1458116 bp

Guanine Count

1776880 bp

Cytosine Count

1826734 bp

Genome Length

6502696 bp

Protein-coding Genes

5545 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endopeptidase laDWX10_02560Not AvailableNegative578740 - 58105586925.5
atp-dependent clp protease atp-binding subunit clpxDWX10_02565Not AvailableNegative581153 - 58246948430.5
atp-dependent clp endopeptidase proteolytic subunit clppDWX10_02570Not AvailableNegative582509 - 58309021213.5
trigger factorDWX10_02575Not AvailableNegative583207 - 58449348336.5
dj-1 family proteinDWX10_02580Not AvailableNegative584676 - 58523019521.6
cyth domain-containing proteinDWX10_02585Not AvailablePositive585526 - 58599317915.3
hypothetical proteinDWX10_02590Not AvailableNegative586132 - 5863478461.37
beta-methylgalactoside transporterDWX10_02595Not AvailableNegative586354 - 58735835658.9
sugar abc transporter atp-binding proteinDWX10_02600Not AvailableNegative587377 - 58888255636.9
galactose abc transporter substrate-binding proteinDWX10_02605Not AvailableNegative588955 - 59010040718.4

Displaying genes 691 – 700 of 5745 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.