Clostridium sp. AF18-27

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF18-27 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait can be significant for its replication and gene expression efficiency. The organism is cataloged under the accession number QUGT00000000.1, which provides a reference point for researchers interested in its genomic characteristics and potential applications. As a member of the Clostridium genus, it may share common metabolic pathways and ecological roles with other species within this group. Clostridia are generally known for their ability to thrive in anaerobic environments and their involvement in various biogeochemical cycles, particularly in the degradation of organic matter. The single replicon configuration could suggest that Clostridium sp. AF18-27 has adapted to its niche in a manner that optimizes its survival and function. This adaptation may allow for efficient resource utilization in its environment, potentially influencing microbial community dynamics. Understanding the specific traits and behaviors of this strain can contribute to a broader comprehension of clostridial ecology, particularly in anaerobic habitats where they play critical roles in nutrient cycling and energy flow. Overall, the distinct genomic feature of a single replicon in Clostridium sp. AF18-27 may offer insights into its ecological strategies and functional capabilities within its ecosystem.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF18-27
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF18-27


Gene Summary

Adenine Count

1440605 bp

Thymine Count

1458116 bp

Guanine Count

1776880 bp

Cytosine Count

1826734 bp

Genome Length

6502696 bp

Protein-coding Genes

5545 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase family 1 proteinDWX10_21830Not AvailablePositive4827572 - 482902656791.3
hamp domain-containing proteinDWX10_21835Not AvailablePositive4829283 - 483103166122.1
extracellular solute-binding proteinDWX10_21840Not AvailablePositive4831028 - 483227845110.7
response regulatorDWX10_21845Not AvailablePositive4832305 - 483307529724.0
lysr family transcriptional regulatorDWX10_21850Not AvailableNegative4833149 - 483404233635.7
hypothetical proteinDWX10_21855Not AvailableNegative4834235 - 483472018466.7
duf1275 domain-containing proteinDWX10_21860Not AvailablePositive4834977 - 483568124988.6
pts glucose transporter subunit iiaDWX10_21865Not AvailablePositive4836185 - 483841378712.7
deor/glpr transcriptional regulatorDWX10_21870Not AvailablePositive4838546 - 483929227354.2
glycyl-radical enzyme activating proteinDWX10_21875Not AvailableNegative4839693 - 484060133080.9

Displaying genes 4291 – 4300 of 5745 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.