Clostridium sp. AF18-27

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF18-27 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait can be significant for its replication and gene expression efficiency. The organism is cataloged under the accession number QUGT00000000.1, which provides a reference point for researchers interested in its genomic characteristics and potential applications. As a member of the Clostridium genus, it may share common metabolic pathways and ecological roles with other species within this group. Clostridia are generally known for their ability to thrive in anaerobic environments and their involvement in various biogeochemical cycles, particularly in the degradation of organic matter. The single replicon configuration could suggest that Clostridium sp. AF18-27 has adapted to its niche in a manner that optimizes its survival and function. This adaptation may allow for efficient resource utilization in its environment, potentially influencing microbial community dynamics. Understanding the specific traits and behaviors of this strain can contribute to a broader comprehension of clostridial ecology, particularly in anaerobic habitats where they play critical roles in nutrient cycling and energy flow. Overall, the distinct genomic feature of a single replicon in Clostridium sp. AF18-27 may offer insights into its ecological strategies and functional capabilities within its ecosystem.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF18-27
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF18-27 AF18-27.Scaf53, whole genome shotgun

Gene Summary

Adenine Count

1440605 bp

Thymine Count

1458116 bp

Guanine Count

1776880 bp

Cytosine Count

1826734 bp

Genome Length

6502696 bp

Protein-coding Genes

5545 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorDWX10_14230Not AvailableNegative3218247 - 321904731075.1
hypothetical proteinDWX10_14235Not AvailableNegative3219079 - 322089968452.7
amidohydrolaseDWX10_14240Not AvailableNegative3221115 - 322226941804.3
sodium:alanine symporter family proteinDWX10_14245Not AvailableNegative3222296 - 322369348885.9
diaminopropionate ammonia-lyaseDWX10_14250Not AvailableNegative3223731 - 322501745992.8
gntr family transcriptional regulatorDWX10_14255Not AvailablePositive3225177 - 322583324506.1
sugar phosphate isomerase/epimeraseDWX10_14260Not AvailableNegative3225910 - 322670129555.2
sugar phosphate isomerase/epimeraseDWX10_14265Not AvailableNegative3226719 - 322751030923.1
hypothetical proteinDWX10_14270Not AvailableNegative3227527 - 322803019693.9
zn-dependent hydrolaseDWX10_14275Not AvailableNegative3228036 - 322927144963.6

Displaying genes 2961 – 2970 of 5745 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.