Ruminococcus sp. AF19-29

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF19-29 is a Gram-positive bacterium characterized by its cocci shape. Notably, it possesses flagella, which may play a role in its motility and ability to navigate its environment. This species has a single replicon, indicating that it contains one complete chromosome, a trait that can reflect its genomic organization and replication mechanisms. The accession number for Ruminococcus sp. AF19-29 is QUGM00000000.1, which provides a reference for genomic data associated with this organism. This information is essential for researchers seeking to explore its genetic makeup and potential applications in microbiology. Ecologically, Ruminococcus species are often associated with the gut microbiota of various animals, particularly ruminants. They are known for their role in the fermentation of complex carbohydrates, contributing to the digestion of plant materials. This function highlights their significance in nutrient cycling within the gut ecosystem and their potential impact on host health. The presence of flagella suggests that Ruminococcus sp. AF19-29 may also have adaptations that enhance its survival and colonization in diverse environments, further underscoring its ecological importance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF19-29
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF19-29
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF19-29 AF19-29.Scaf135, whole genome shotgun

Gene Summary

Adenine Count

1292262 bp

Thymine Count

1221563 bp

Guanine Count

930391 bp

Cytosine Count

843712 bp

Genome Length

4288468 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseDWX46_00265Not AvailablePositive63917 - 6473230566.8
extracellular solute-binding proteinDWX46_00270Not AvailablePositive64744 - 6658869253.2
spermidine/putrescine abc transporter substrate-binding proteinDWX46_00275Not AvailablePositive66678 - 6771238221.9
phosphoenolpyruvate--protein phosphotransferaseDWX46_00280Not AvailablePositive67738 - 6937262039.0
duf362 domain-containing proteinDWX46_00285Not AvailablePositive69435 - 7051139492.5
homocysteine s-methyltransferase family proteinDWX46_00290Not AvailableNegative70768 - 7164030668.8
aldose 1-epimerase family proteinDWX46_00295Not AvailableNegative71789 - 7266433138.8
6-phosphofructokinaseDWX46_00300Not AvailablePositive73150 - 7440645956.6
pyruvate, phosphate dikinaseDWX46_00305Not AvailablePositive74766 - 7739696330.6
crispr-associated endoribonuclease cas6DWX46_00310Not AvailablePositive77863 - 7860328497.5

Displaying genes 81 – 90 of 3839 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.