Ruminococcus sp. AF19-29

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF19-29 is a Gram-positive bacterium characterized by its cocci shape. Notably, it possesses flagella, which may play a role in its motility and ability to navigate its environment. This species has a single replicon, indicating that it contains one complete chromosome, a trait that can reflect its genomic organization and replication mechanisms. The accession number for Ruminococcus sp. AF19-29 is QUGM00000000.1, which provides a reference for genomic data associated with this organism. This information is essential for researchers seeking to explore its genetic makeup and potential applications in microbiology. Ecologically, Ruminococcus species are often associated with the gut microbiota of various animals, particularly ruminants. They are known for their role in the fermentation of complex carbohydrates, contributing to the digestion of plant materials. This function highlights their significance in nutrient cycling within the gut ecosystem and their potential impact on host health. The presence of flagella suggests that Ruminococcus sp. AF19-29 may also have adaptations that enhance its survival and colonization in diverse environments, further underscoring its ecological importance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF19-29
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF19-29
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF19-29 AF19-29.Scaf135, whole genome shotgun

Gene Summary

Adenine Count

1292262 bp

Thymine Count

1221563 bp

Guanine Count

930391 bp

Cytosine Count

843712 bp

Genome Length

4288468 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylosuccinate synthaseDWX46_01675Not AvailablePositive391902 - 39318247015.4
had family phosphataseDWX46_01680Not AvailablePositive393276 - 39410332052.4
hypothetical proteinDWX46_01685Not AvailablePositive394192 - 3944108481.96
sec-c domain-containing proteinDWX46_01690Not AvailablePositive394558 - 39507319764.6
ydcf family proteinDWX46_01695Not AvailablePositive395066 - 39554518047.1
shikimate dehydrogenaseDWX46_01700Not AvailableNegative395561 - 39643331631.0
hypothetical proteinDWX46_01705Not AvailablePositive396729 - 39758631553.0
rna polymerase sporulation sigma factor sigeDWX46_01710Not AvailablePositive397604 - 39831426799.8
radical sam proteinDWX46_01715Not AvailablePositive398423 - 39945739081.9
trkh family potassium uptake proteinDWX46_01720Not AvailableNegative399632 - 40107152746.1

Displaying genes 351 – 360 of 3839 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.