Ruminococcus sp. AF19-29

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF19-29 is a Gram-positive bacterium characterized by its cocci shape. Notably, it possesses flagella, which may play a role in its motility and ability to navigate its environment. This species has a single replicon, indicating that it contains one complete chromosome, a trait that can reflect its genomic organization and replication mechanisms. The accession number for Ruminococcus sp. AF19-29 is QUGM00000000.1, which provides a reference for genomic data associated with this organism. This information is essential for researchers seeking to explore its genetic makeup and potential applications in microbiology. Ecologically, Ruminococcus species are often associated with the gut microbiota of various animals, particularly ruminants. They are known for their role in the fermentation of complex carbohydrates, contributing to the digestion of plant materials. This function highlights their significance in nutrient cycling within the gut ecosystem and their potential impact on host health. The presence of flagella suggests that Ruminococcus sp. AF19-29 may also have adaptations that enhance its survival and colonization in diverse environments, further underscoring its ecological importance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF19-29
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF19-29
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF19-29 AF19-29.Scaf135, whole genome shotgun

Gene Summary

Adenine Count

1292262 bp

Thymine Count

1221563 bp

Guanine Count

930391 bp

Cytosine Count

843712 bp

Genome Length

4288468 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cys-trna(pro) deacylaseDWX46_00785Not AvailablePositive183532 - 18401717651.6
atp-binding cassette domain-containing proteinDWX46_00790Not AvailableNegative184059 - 18569961658.4
rrf2 family transcriptional regulatorDWX46_00795Not AvailablePositive186051 - 18645815459.8
pyruvate:ferredoxin (flavodoxin) oxidoreductaseDWX46_00800Not AvailablePositive186733 - 190269127312.0
hypothetical proteinDWX46_00805Not AvailablePositive190743 - 193478104091.0
glycosyltransferaseDWX46_00810Not AvailablePositive193789 - 19472434925.6
gtra family proteinDWX46_00815Not AvailablePositive194738 - 19515415948.2
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseDWX46_00820Not AvailablePositive195179 - 19623137289.4
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseDWX46_00825Not AvailablePositive196231 - 19677319876.6
adenosylcobinamide-gdp ribazoletransferaseDWX46_00830Not AvailablePositive196819 - 19759528423.2

Displaying genes 181 – 190 of 3839 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.