Clostridium sp. AF20-17LB

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF20-17LB is characterized by having a single replicon, which reflects its genomic organization. This bacterium is cataloged under the accession number QUGG00000000.1, signifying its entry in genomic databases for reference and further research. The genomic traits suggest a streamlined genetic framework, which can be beneficial for its adaptability and survival in various environments. Clostridia are known for their diverse metabolic pathways, often capable of anaerobic fermentation, which could indicate potential ecological roles in nutrient cycling, particularly in environments rich in organic matter. This specific strain, Clostridium sp. AF20-17LB, may contribute to the breakdown of complex substrates in anaerobic conditions, facilitating the recycling of nutrients in its ecosystem. Understanding its genomic structure and metabolic capabilities can provide insights into its ecological functions and potential applications in bioremediation or biotechnology. The presence of a single replicon may also hint at evolutionary adaptations that allow this microorganism to thrive in specific niches. Further investigation could reveal more about its ecological interactions and potential utility in environmental management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF20-17LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF20-17LB AF20-17LB.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c4-dicarboxylate abc transporter permeaseDWX64_04210Not AvailableNegative913377 - 91485551505.6
tripartite tricarboxylate transporter tctb family proteinDWX64_04215Not AvailableNegative914868 - 91533216816.7
tripartite tricarboxylate transporter substrate binding proteinDWX64_04220Not AvailableNegative915412 - 91647036511.9
2-dehydro-3-deoxygalactonokinaseDWX64_04225Not AvailableNegative916684 - 91769436087.4
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseDWX64_04230Not AvailableNegative917853 - 91850923260.4
30s ribosomal protein s21DWX64_04235Not AvailableNegative918749 - 9189256947.4
alanine--trna ligaseDWX64_04240Not AvailableNegative919089 - 92174397546.2
duf1311 domain-containing proteinDWX64_04245Not AvailableNegative922063 - 92286029192.7
ribonuclease hiDWX64_04250Not AvailableNegative923090 - 92356917508.7
mbl fold metallo-hydrolaseDWX64_04255Not AvailableNegative923638 - 92523959378.9

Displaying genes 871 – 880 of 3088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.