Clostridium sp. AF20-17LB

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF20-17LB is characterized by having a single replicon, which reflects its genomic organization. This bacterium is cataloged under the accession number QUGG00000000.1, signifying its entry in genomic databases for reference and further research. The genomic traits suggest a streamlined genetic framework, which can be beneficial for its adaptability and survival in various environments. Clostridia are known for their diverse metabolic pathways, often capable of anaerobic fermentation, which could indicate potential ecological roles in nutrient cycling, particularly in environments rich in organic matter. This specific strain, Clostridium sp. AF20-17LB, may contribute to the breakdown of complex substrates in anaerobic conditions, facilitating the recycling of nutrients in its ecosystem. Understanding its genomic structure and metabolic capabilities can provide insights into its ecological functions and potential applications in bioremediation or biotechnology. The presence of a single replicon may also hint at evolutionary adaptations that allow this microorganism to thrive in specific niches. Further investigation could reveal more about its ecological interactions and potential utility in environmental management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF20-17LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF20-17LB AF20-17LB.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold-shock proteinDWX64_02560Not AvailablePositive568817 - 5690297770.04
atp-binding cassette domain-containing proteinDWX64_02565Not AvailablePositive569517 - 57115461749.6
mate family efflux transporterDWX64_02570Not AvailableNegative571279 - 57263748211.6
biotin transporter bioyDWX64_02575Not AvailablePositive573079 - 57363619410.8
sdr family nad(p)-dependent oxidoreductaseDWX64_02580Not AvailableNegative573747 - 57449026340.8
mandelate racemaseDWX64_02585Not AvailableNegative574539 - 57565442042.8
rraa family proteinDWX64_02590Not AvailablePositive575843 - 57650524391.4
gntr family transcriptional regulatorDWX64_02595Not AvailableNegative576608 - 57724324650.7
mandelate racemase/muconate lactonizing enzyme family proteinDWX64_02600Not AvailablePositive577418 - 57851241464.5
alcohol dehydrogenaseDWX64_02605Not AvailablePositive578526 - 57954536648.8

Displaying genes 551 – 560 of 3088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.