Clostridium sp. AF20-17LB

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF20-17LB is characterized by having a single replicon, which reflects its genomic organization. This bacterium is cataloged under the accession number QUGG00000000.1, signifying its entry in genomic databases for reference and further research. The genomic traits suggest a streamlined genetic framework, which can be beneficial for its adaptability and survival in various environments. Clostridia are known for their diverse metabolic pathways, often capable of anaerobic fermentation, which could indicate potential ecological roles in nutrient cycling, particularly in environments rich in organic matter. This specific strain, Clostridium sp. AF20-17LB, may contribute to the breakdown of complex substrates in anaerobic conditions, facilitating the recycling of nutrients in its ecosystem. Understanding its genomic structure and metabolic capabilities can provide insights into its ecological functions and potential applications in bioremediation or biotechnology. The presence of a single replicon may also hint at evolutionary adaptations that allow this microorganism to thrive in specific niches. Further investigation could reveal more about its ecological interactions and potential utility in environmental management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF20-17LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF20-17LB AF20-17LB.Scaf66, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (uracil(1498)-n(3))-methyltransferaseDWX64_00200Not AvailablePositive47161 - 4791627403.5
cysteine desulfuraseDWX64_00205Not AvailablePositive48026 - 4918942357.8
trna 4-thiouridine(8) synthase thiiDWX64_00210Not AvailablePositive49217 - 5039844455.1
hpr family phosphocarrier proteinDWX64_00215Not AvailableNegative50490 - 507268648.46
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabDWX64_00220Not AvailablePositive51000 - 5231949992.0
ireb family regulatory phosphoproteinDWX64_00225Not AvailablePositive52607 - 5287010159.2
holliday junction resolvase ruvxDWX64_00230Not AvailablePositive52989 - 5343216679.2
duf1292 domain-containing proteinDWX64_00235Not AvailablePositive53513 - 5378210250.7
transcriptional repressorDWX64_00240Not AvailablePositive53884 - 5436918284.9
ribonuclease jDWX64_00245Not AvailablePositive54359 - 5602660990.3

Displaying genes 121 – 130 of 3088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.