Clostridium sp. AF21-20LB

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF21-20LB is a bacterial strain characterized by having a single replicon, which is significant for its genetic stability and replication process. The strain's genetic information is accessible through its accession number QUGD00000000.1, providing a reference for further research and analysis. One important aspect of Clostridium species, including AF21-20LB, is their role in various ecological contexts. Clostridia are commonly found in anaerobic environments, such as soil, sediments, and the gastrointestinal tracts of animals. They are known for their ability to ferment organic materials, which can contribute to nutrient cycling in ecosystems. The presence of a single replicon in Clostridium sp. AF21-20LB may also indicate its adaptation to specific environmental niches, allowing it to thrive in conditions where other microorganisms may struggle. Understanding the genetic makeup and stability of this strain can offer insights into its metabolic capabilities and ecological roles, particularly in anaerobic processes. Overall, Clostridium sp. AF21-20LB exemplifies the diversity and adaptability of microorganisms within their environments, underscoring the importance of studying such strains for insights into microbial ecology and potential applications in biotechnology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF21-20LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF21-20LB AF21-20LB.Scaf70, whole genome shotgun

Gene Summary

Adenine Count

738905 bp

Thymine Count

751923 bp

Guanine Count

696958 bp

Cytosine Count

708709 bp

Genome Length

2896495 bp

Protein-coding Genes

2287 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-4-dehydrorhamnose 3,5-epimeraseDWX76_00180Not AvailableNegative42892 - 4344621037.9
duf2304 domain-containing proteinDWX76_00185Not AvailableNegative43537 - 4392014437.1
glycosyltransferase family 2 proteinDWX76_00190Not AvailableNegative43925 - 4466227671.6
glycosyltransferase family 2 proteinDWX76_00200Not AvailableNegative45598 - 4644633486.4
duf2142 domain-containing proteinDWX76_00205Not AvailableNegative46705 - 4867573330.2
phosphocholine cytidylyltransferase family proteinDWX76_00210Not AvailableNegative48901 - 4962027412.8
alanine--glyoxylate aminotransferase family proteinDWX76_00215Not AvailableNegative49617 - 5070840244.5
hypothetical proteinDWX76_00220Not AvailableNegative50724 - 509157585.27
lipopolysaccharide biosynthesis proteinDWX76_00225Not AvailableNegative50905 - 5212844659.5
licd family proteinDWX76_00230Not AvailableNegative52188 - 5304834142.0

Displaying genes 31 – 40 of 2346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.