Ruminococcus sp. AF21-3

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF21-3 is a Gram-positive, cocci-shaped bacterium known for its role in the digestive processes of ruminant animals. This species is characterized by the presence of flagella, which may aid in mobility within its ecological niche. Ruminococcus sp. AF21-3 has a single replicon, indicating a simplified genomic architecture that may contribute to its adaptability in various environments. The accession number for Ruminococcus sp. AF21-3 is QUGC00000000.1, which is part of genomic data that can be utilized for further study and classification within the Ruminococcus genus. These bacteria are important in the fermentation processes associated with the breakdown of complex carbohydrates in the rumen, contributing significantly to the nutritional efficiency of ruminants. Ecologically, Ruminococcus sp. AF21-3 may play a pivotal role in maintaining the health of its host by facilitating the digestion of plant materials, thus influencing nutrient availability and energy extraction. This interaction highlights the importance of microbial communities in the digestive systems of ruminants, where they contribute to the overall metabolic processes essential for the host's well-being. Understanding the traits and functions of Ruminococcus sp. AF21-3 can provide insights into microbial ecology and the symbiotic relationships that underpin the digestive health of ruminants.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF21-3
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF21-3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF21-3 AF21-3.Scaf197, whole genome shotgun

Gene Summary

Adenine Count

1212131 bp

Thymine Count

1205206 bp

Guanine Count

843606 bp

Cytosine Count

839452 bp

Genome Length

4100740 bp

Protein-coding Genes

3254 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l29DWX80_04775Not AvailableNegative1087329 - 10875387889.5
50s ribosomal protein l16DWX80_04780Not AvailableNegative1087528 - 108796516293.2
30s ribosomal protein s3DWX80_04785Not AvailableNegative1087965 - 108862124316.4
50s ribosomal protein l22DWX80_04790Not AvailableNegative1088633 - 108902214510.5
30s ribosomal protein s19DWX80_04795Not AvailableNegative1089111 - 108939210322.4
50s ribosomal protein l2DWX80_04800Not AvailableNegative1089408 - 109025330386.2
50s ribosomal protein l23DWX80_04805Not AvailableNegative1090315 - 109061411191.8
50s ribosomal protein l4DWX80_04810Not AvailableNegative1090614 - 109123422511.0
50s ribosomal protein l3DWX80_04815Not AvailableNegative1091256 - 109188822665.3
30s ribosomal protein s10DWX80_04820Not AvailableNegative1092068 - 109238511838.7

Displaying genes 851 – 860 of 3316 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.