Ruminococcus sp. AF21-42

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF21-42 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which suggests potential motility in its environment. Genetically, it is noted to have one replicon, indicating a relatively simple genomic structure. The accession number for Ruminococcus sp. AF21-42 is QUGB00000000.1, which serves as a reference for its genomic data in biological databases. This information can be useful for researchers interested in the genetic and functional characteristics of this bacterium. In terms of ecological significance, Ruminococcus species are commonly associated with the gastrointestinal tracts of various animals, where they play a vital role in the fermentation of complex polysaccharides. Their ability to thrive in anaerobic environments and contribute to the breakdown of plant materials underscores their importance in digestive processes and nutrient cycling within ecosystems. Ruminococcus sp. AF21-42 may also have implications for studies on gut microbiota and its effects on host health, making it a relevant subject for further microbiological research.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF21-42
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF21-42
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF21-42 AF21-42.Scaf47, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3178 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trans-2-enoyl-coa reductase family proteinDWX83_01675Not AvailablePositive347602 - 34878643784.0
hypothetical proteinDWX83_01680Not AvailableNegative348863 - 34962729814.2
glycoside hydrolase family 2 proteinDWX83_01685Not AvailablePositive349925 - 35237895846.8
gntr family transcriptional regulatorDWX83_01690Not AvailablePositive352582 - 35380245389.6
extracellular solute-binding proteinDWX83_01695Not AvailablePositive353834 - 35534856899.1
sugar abc transporter permeaseDWX83_01700Not AvailablePositive355442 - 35629631579.6
carbohydrate abc transporter permeaseDWX83_01705Not AvailablePositive356300 - 35711530141.9
glycoside hydrolase family 125 proteinDWX83_01710Not AvailablePositive357145 - 35843149161.0
alpha-mannosidaseDWX83_01715Not AvailablePositive358456 - 361593120738.0
duf1292 domain-containing proteinDWX83_01720Not AvailableNegative361737 - 36211713507.4

Displaying genes 421 – 430 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.