Ruminococcus sp. AF21-42

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF21-42 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which suggests potential motility in its environment. Genetically, it is noted to have one replicon, indicating a relatively simple genomic structure. The accession number for Ruminococcus sp. AF21-42 is QUGB00000000.1, which serves as a reference for its genomic data in biological databases. This information can be useful for researchers interested in the genetic and functional characteristics of this bacterium. In terms of ecological significance, Ruminococcus species are commonly associated with the gastrointestinal tracts of various animals, where they play a vital role in the fermentation of complex polysaccharides. Their ability to thrive in anaerobic environments and contribute to the breakdown of plant materials underscores their importance in digestive processes and nutrient cycling within ecosystems. Ruminococcus sp. AF21-42 may also have implications for studies on gut microbiota and its effects on host health, making it a relevant subject for further microbiological research.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF21-42
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF21-42
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF21-42 AF21-42.Scaf47, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3178 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDWX83_01030Not AvailablePositive208240 - 20861714264.6
ykgj family cysteine cluster proteinDWX83_01035Not AvailablePositive208694 - 20936225850.9
phosphopentomutaseDWX83_01040Not AvailablePositive209423 - 21061344272.9
hd domain-containing proteinDWX83_01045Not AvailablePositive210714 - 21127721805.7
hypothetical proteinDWX83_01050Not AvailableNegative211383 - 21257047160.1
putative hydro-lyaseDWX83_01055Not AvailableNegative212570 - 21339430463.6
lysr family transcriptional regulatorDWX83_01060Not AvailableNegative213503 - 21439333521.6
aminotransferase class v-fold plp-dependent enzymeDWX83_01065Not AvailableNegative214400 - 21558743120.8
ggdef domain-containing proteinDWX83_01070Not AvailablePositive215842 - 21819090544.6
tryptophan--trna ligaseDWX83_01075Not AvailableNegative218276 - 21933740078.2

Displaying genes 301 – 310 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.