Ruminococcus sp. AF21-42

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF21-42 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which suggests potential motility in its environment. Genetically, it is noted to have one replicon, indicating a relatively simple genomic structure. The accession number for Ruminococcus sp. AF21-42 is QUGB00000000.1, which serves as a reference for its genomic data in biological databases. This information can be useful for researchers interested in the genetic and functional characteristics of this bacterium. In terms of ecological significance, Ruminococcus species are commonly associated with the gastrointestinal tracts of various animals, where they play a vital role in the fermentation of complex polysaccharides. Their ability to thrive in anaerobic environments and contribute to the breakdown of plant materials underscores their importance in digestive processes and nutrient cycling within ecosystems. Ruminococcus sp. AF21-42 may also have implications for studies on gut microbiota and its effects on host health, making it a relevant subject for further microbiological research.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF21-42
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF21-42
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF21-42 AF21-42.Scaf47, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3178 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i glyceraldehyde-3-phosphate dehydrogenaseDWX83_00880Not AvailablePositive177439 - 17845836160.3
phosphoglycerate kinaseDWX83_00885Not AvailablePositive178645 - 17983842331.8
triose-phosphate isomeraseDWX83_00890Not AvailablePositive179882 - 18063126914.4
duf554 family proteinDWX83_00895Not AvailableNegative181169 - 1813938646.59
nadp-dependent malic enzymeDWX83_00900Not AvailableNegative181690 - 18288042518.5
ldh family oxidoreductaseDWX83_00905Not AvailableNegative182971 - 18410141436.7
hypothetical proteinDWX83_00915Not AvailablePositive185003 - 18529911237.9
gtp pyrophosphokinaseDWX83_00920Not AvailablePositive186045 - 18663823102.9
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdDWX83_00925Not AvailablePositive186705 - 18785643430.0
threonine/serine exporterDWX83_00930Not AvailablePositive187966 - 18873027578.2

Displaying genes 271 – 280 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.