Ruminococcus sp. AF21-42

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF21-42 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which suggests potential motility in its environment. Genetically, it is noted to have one replicon, indicating a relatively simple genomic structure. The accession number for Ruminococcus sp. AF21-42 is QUGB00000000.1, which serves as a reference for its genomic data in biological databases. This information can be useful for researchers interested in the genetic and functional characteristics of this bacterium. In terms of ecological significance, Ruminococcus species are commonly associated with the gastrointestinal tracts of various animals, where they play a vital role in the fermentation of complex polysaccharides. Their ability to thrive in anaerobic environments and contribute to the breakdown of plant materials underscores their importance in digestive processes and nutrient cycling within ecosystems. Ruminococcus sp. AF21-42 may also have implications for studies on gut microbiota and its effects on host health, making it a relevant subject for further microbiological research.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF21-42
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF21-42
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF21-42 AF21-42.Scaf47, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3178 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l11 methyltransferaseDWX83_00160Not AvailablePositive37179 - 3813235408.2
16s rrna (uracil(1498)-n(3))-methyltransferaseDWX83_00165Not AvailablePositive38137 - 3888328250.3
cysteine desulfuraseDWX83_00170Not AvailablePositive39014 - 4016842073.9
trna 4-thiouridine(8) synthase thiiDWX83_00175Not AvailablePositive40196 - 4137744491.8
hpr family phosphocarrier proteinDWX83_00180Not AvailableNegative41583 - 418198526.41
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabDWX83_00185Not AvailablePositive41991 - 4331350125.0
ireb family regulatory phosphoproteinDWX83_00190Not AvailablePositive43385 - 4365710532.5
holliday junction resolvase ruvxDWX83_00195Not AvailablePositive43659 - 4408116153.7
duf1292 domain-containing proteinDWX83_00200Not AvailablePositive44094 - 443519892.32
ribonuclease jDWX83_00205Not AvailablePositive44600 - 4628261946.2

Displaying genes 151 – 160 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.