Clostridium sp. AF22-10

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF22-10 is characterized by having a single replicon, which indicates a streamlined genomic structure that may facilitate efficient replication and cellular processes. The genetic information for this strain is available under the accession QUFZ00000000.1, which allows for further examination and analysis of its genomic features. The presence of a single replicon suggests a potential adaptation to specific environmental conditions, as many bacteria with single replicons are often found in stable habitats where they can thrive without the need for complex regulatory mechanisms associated with multiple replicons. This trait may provide insights into the ecological role of Clostridium sp. AF22-10, particularly in its ability to occupy niches that require rapid growth or efficient resource utilization. Clostridium species are often known for their anaerobic metabolism, and while specific metabolic pathways for AF22-10 are not detailed, the genus typically includes organisms that can break down complex organic materials. This capability could imply a role in nutrient cycling within its ecosystem, potentially contributing to processes such as organic matter decomposition. In summary, Clostridium sp. AF22-10, with its single replicon and accessible genomic data, presents an opportunity for further research into its ecological functions, particularly in anaerobic environments where such microbes play a critical role in maintaining ecosystem health and stability.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF22-10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF22-10 AF22-10.Scaf86, whole genome shotgun

Gene Summary

Adenine Count

864548 bp

Thymine Count

905980 bp

Guanine Count

739989 bp

Cytosine Count

834176 bp

Genome Length

3344693 bp

Protein-coding Genes

2704 genes

Non-Coding Genes

154 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system yafq family toxinDWX91_04595Not AvailablePositive1030228 - 103050911019.5
tigr00730 family rossman fold proteinDWX91_04600Not AvailablePositive1030544 - 103108019441.4
n-acetyltransferaseDWX91_04605Not AvailablePositive1031160 - 103160316908.2
abc transporter atp-binding proteinDWX91_04615Not AvailableNegative1034345 - 103501924637.8
sensor histidine kinaseDWX91_04620Not AvailableNegative1035133 - 103639848348.8
dna-binding response regulatorDWX91_04625Not AvailableNegative1036374 - 103706926601.2
response regulatorDWX91_04635Not AvailableNegative1037255 - 103828938687.4
response regulatorDWX91_04640Not AvailableNegative1038443 - 1041649122079.0
xre family transcriptional regulatorDWX91_04660Not AvailablePositive1044186 - 10444469784.8
blai/meci/copy family transcriptional regulatorDWX91_04665Not AvailablePositive1044638 - 104502414671.5

Displaying genes 921 – 930 of 2858 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.