Clostridium sp. AF22-10

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF22-10 is characterized by having a single replicon, which indicates a streamlined genomic structure that may facilitate efficient replication and cellular processes. The genetic information for this strain is available under the accession QUFZ00000000.1, which allows for further examination and analysis of its genomic features. The presence of a single replicon suggests a potential adaptation to specific environmental conditions, as many bacteria with single replicons are often found in stable habitats where they can thrive without the need for complex regulatory mechanisms associated with multiple replicons. This trait may provide insights into the ecological role of Clostridium sp. AF22-10, particularly in its ability to occupy niches that require rapid growth or efficient resource utilization. Clostridium species are often known for their anaerobic metabolism, and while specific metabolic pathways for AF22-10 are not detailed, the genus typically includes organisms that can break down complex organic materials. This capability could imply a role in nutrient cycling within its ecosystem, potentially contributing to processes such as organic matter decomposition. In summary, Clostridium sp. AF22-10, with its single replicon and accessible genomic data, presents an opportunity for further research into its ecological functions, particularly in anaerobic environments where such microbes play a critical role in maintaining ecosystem health and stability.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF22-10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF22-10 AF22-10.Scaf86, whole genome shotgun

Gene Summary

Adenine Count

864548 bp

Thymine Count

905980 bp

Guanine Count

739989 bp

Cytosine Count

834176 bp

Genome Length

3344693 bp

Protein-coding Genes

2704 genes

Non-Coding Genes

154 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfurtransferase-like selenium metabolism protein yedfDWX91_00595Not AvailableNegative131946 - 13256321900.2
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive133270 - 133617Not Available
selenide, water dikinase seldDWX91_00600Not AvailableNegative132576 - 13361036456.8
arsenate reductase family proteinDWX91_00610Not AvailableNegative134430 - 13478013780.8
ion transporterDWX91_00615Not AvailablePositive135177 - 13613936585.3
phenylalanine--trna ligase subunit betaDWX91_00620Not AvailableNegative136369 - 13878989796.9
phenylalanine--trna ligase subunit alphaDWX91_00625Not AvailableNegative138810 - 13985339497.3
beta-aspartyl-peptidaseDWX91_00635Not AvailableNegative140997 - 14214541159.6
putative basic amino acid antiporter yfccDWX91_00640Not AvailableNegative142232 - 14375254079.1
acylphosphataseDWX91_00645Not AvailableNegative144067 - 14433310372.5

Displaying genes 231 – 240 of 2858 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.