Roseburia sp. AF25-15LB

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF25-15LB is a rod-shaped bacterium that possesses flagella, which suggests it has the capability for motility. This characteristic may facilitate its interaction with nutrient sources and its environment within microbial communities. The organism has a single replicon, indicating a streamlined genetic organization that is common in certain bacteria. The genome of Roseburia sp. AF25-15LB is cataloged under the accession number QUFN00000000.1, providing a basis for further genomic studies and comparisons with other members of the Roseburia genus. Ecologically, members of the Roseburia genus are known to be part of the gut microbiota, particularly in humans and other mammals. They play a significant role in the fermentation of dietary fibers, leading to the production of short-chain fatty acids, which are beneficial for gut health. The motility conferred by flagella may enhance the bacterium's ability to colonize specific niches within the gastrointestinal tract, contributing to its ecological fitness and functional role in maintaining gut homeostasis. Thus, Roseburia sp. AF25-15LB may have implications for understanding the dynamics of gut microbiomes and their impact on host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF25-15LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF25-15LB AF25-15LB.Scaf36, whole genome shotgun

Gene Summary

Adenine Count

902528 bp

Thymine Count

954845 bp

Guanine Count

612515 bp

Cytosine Count

673338 bp

Genome Length

3143481 bp

Protein-coding Genes

2879 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
noncanonical pyrimidine nucleotidase, yjjg familyDWY39_03485Not AvailableNegative727978 - 72868526882.2
magnesium transporterDWY39_03490Not AvailableNegative728718 - 73010952115.0
hypothetical proteinDWY39_03495Not AvailablePositive730718 - 7309247809.47
xre family transcriptional regulatorDWY39_03500Not AvailableNegative730982 - 73154521244.2
iron-containing alcohol dehydrogenaseDWY39_03505Not AvailableNegative731655 - 73283941888.2
amino acid permeaseDWY39_03510Not AvailableNegative732926 - 73444954270.3
cytidylate kinase-like family proteinDWY39_03515Not AvailableNegative734462 - 73506722548.3
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeDWY39_03520Not AvailableNegative735280 - 73649744171.4
gtpase (g3e family)DWY39_03525Not AvailableNegative736940 - 73788435507.7
response regulatorDWY39_03530Not AvailableNegative737902 - 74051199199.7

Displaying genes 691 – 700 of 2937 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.