Roseburia sp. AF25-15LB

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AF25-15LB is a rod-shaped bacterium that possesses flagella, which suggests it has the capability for motility. This characteristic may facilitate its interaction with nutrient sources and its environment within microbial communities. The organism has a single replicon, indicating a streamlined genetic organization that is common in certain bacteria. The genome of Roseburia sp. AF25-15LB is cataloged under the accession number QUFN00000000.1, providing a basis for further genomic studies and comparisons with other members of the Roseburia genus. Ecologically, members of the Roseburia genus are known to be part of the gut microbiota, particularly in humans and other mammals. They play a significant role in the fermentation of dietary fibers, leading to the production of short-chain fatty acids, which are beneficial for gut health. The motility conferred by flagella may enhance the bacterium's ability to colonize specific niches within the gastrointestinal tract, contributing to its ecological fitness and functional role in maintaining gut homeostasis. Thus, Roseburia sp. AF25-15LB may have implications for understanding the dynamics of gut microbiomes and their impact on host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AF25-15LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AF25-15LB AF25-15LB.Scaf36, whole genome shotgun

Gene Summary

Adenine Count

902528 bp

Thymine Count

954845 bp

Guanine Count

612515 bp

Cytosine Count

673338 bp

Genome Length

3143481 bp

Protein-coding Genes

2879 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieDWY39_01600Not AvailableNegative332726 - 33400648270.8
imidazoleglycerol-phosphate dehydratase hisbDWY39_01605Not AvailableNegative334015 - 33460821902.4
histidinol dehydrogenaseDWY39_01610Not AvailableNegative334624 - 33592247277.2
atp phosphoribosyltransferaseDWY39_01615Not AvailableNegative335925 - 33657824674.3
atp phosphoribosyltransferase regulatory subunitDWY39_01620Not AvailableNegative336581 - 33777445204.8
holliday junction resolvase recuDWY39_01625Not AvailableNegative337868 - 33840120891.9
histidine phosphatase family proteinDWY39_01630Not AvailableNegative338401 - 33904824885.0
rlua family pseudouridine synthaseDWY39_01635Not AvailableNegative339098 - 34005436191.6
ygiq family radical sam proteinDWY39_01640Not AvailableNegative340067 - 34203774741.8
rrna pseudouridine synthaseDWY39_01645Not AvailableNegative342042 - 34275826833.4

Displaying genes 321 – 330 of 2937 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.