Clostridium sp. AM48-13

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM48-13 is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The organism is cataloged under the accession number QUFD00000000.1, allowing for its identification and further study within microbial databases. The limited genomic complexity reflected in the presence of just one replicon could suggest a potential for efficient replication and resource utilization, which might be advantageous in competitive ecosystems. This trait may enable Clostridium sp. AM48-13 to thrive in specific niches where it can exploit available nutrients effectively. Understanding the genomic characteristics of Clostridium sp. AM48-13 provides insights into its ecological role. The organism's single replicon may facilitate rapid growth and adaptation, which can be particularly important in environments with fluctuating nutrient availability. Such traits are often observed in microorganisms that play crucial roles in biogeochemical cycles, particularly in anaerobic conditions where Clostridium species are commonly found. In summary, Clostridium sp. AM48-13, with its single replicon and unique genomic identifier, may hold ecological significance by contributing to nutrient cycling and ecosystem dynamics in its habitat. Further research could elucidate its specific roles and interactions within microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM48-13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM48-13 AM48-13.Scaf97, whole genome shotgun

Gene Summary

Adenine Count

797910 bp

Thymine Count

835797 bp

Guanine Count

733167 bp

Cytosine Count

805517 bp

Genome Length

3172491 bp

Protein-coding Genes

2573 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinDW970_00380Not AvailableNegative67910 - 680926801.53
sigma-70 family rna polymerase sigma factorDW970_00385Not AvailableNegative68089 - 6864321212.7
xre family transcriptional regulatorDW970_00395Not AvailableNegative69424 - 696277721.26
gntr family transcriptional regulatorDW970_00400Not AvailablePositive69835 - 7021814047.2
abc transporter atp-binding proteinDW970_00405Not AvailablePositive70211 - 7107132101.4
abc-2 transporter permeaseDW970_00410Not AvailablePositive71064 - 7171423705.5
dna-binding response regulatorDW970_00415Not AvailablePositive72009 - 7270126096.4
sensor histidine kinaseDW970_00420Not AvailablePositive72727 - 7372837050.0
hypothetical proteinDW970_00425Not AvailablePositive73756 - 7417215769.0
hypothetical proteinDW970_00430Not AvailablePositive74355 - 746159851.39

Displaying genes 121 – 130 of 2662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.