Clostridium sp. AF34-10BH

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF34-10BH is characterized by being a single-replicon organism, which indicates that it possesses one circular chromosome. This trait is significant as it often reflects the organism's genetic stability and evolutionary adaptability. The genomic information for Clostridium sp. AF34-10BH is available under the accession number QUEC00000000.1, which can be accessed for further genetic analysis and research. As a member of the Clostridia class, this organism is expected to exhibit anaerobic metabolic processes, which are typical for this group of bacteria. Clostridia are known for their diverse range of metabolic capabilities, including fermentation and the production of various end products, such as butyric acid and hydrogen gas. These metabolic traits are essential for their survival in anaerobic environments, contributing to nutrient cycling in various ecosystems. Ecologically, Clostridium species play a crucial role in the decomposition of organic matter, particularly in anaerobic environments such as soils, sediments, and the gastrointestinal tracts of animals. By breaking down complex organic materials, they facilitate nutrient recycling and energy flow within these ecosystems. Thus, Clostridium sp. AF34-10BH, with its single-replicon genome, may contribute to similar ecological functions, highlighting the importance of such organisms in maintaining ecosystem health and stability.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF34-10BH
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF34-10BH AF34-10BH.Scaf84, whole genome shotgun

Gene Summary

Adenine Count

1081799 bp

Thymine Count

1092118 bp

Guanine Count

905099 bp

Cytosine Count

922529 bp

Genome Length

4001893 bp

Protein-coding Genes

3633 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rip metalloprotease rsepDWZ61_15075Not AvailablePositive3123939 - 312499438797.5
serine/threonine-protein kinaseDWZ61_15080Not AvailablePositive3125653 - 312667239078.7
fructose-6-phosphate aldolaseDWZ61_15085Not AvailablePositive3126823 - 312747623135.1
small acid-soluble spore proteinDWZ61_15090Not AvailableNegative3127977 - 31281747204.69
abc transporter substrate-binding proteinDWZ61_15095Not AvailablePositive3128753 - 312986839360.6
atp-binding cassette domain-containing proteinDWZ61_15100Not AvailablePositive3129855 - 313121351174.0
iron-only hydrogenase system regulatorDWZ61_15105Not AvailablePositive3131236 - 313151410040.4
trigger factorDWZ61_15110Not AvailablePositive3131607 - 313295650050.3
atp-dependent clp endopeptidase proteolytic subunit clppDWZ61_15115Not AvailablePositive3133125 - 313371221488.8
atp-dependent clp protease atp-binding subunit clpxDWZ61_15120Not AvailablePositive3133874 - 313513646547.8

Displaying genes 3031 – 3040 of 3779 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.