Clostridium sp. AF35-15

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF35-15 is characterized by having a single replicon, indicating a streamlined genomic structure that may influence its adaptability and metabolic efficiency. The organism is cataloged under the accession number QUDY00000000.1, which allows for its identification and reference in various scientific databases. The simplicity of possessing one replicon may suggest potential advantages in terms of gene regulation and replication processes, which can be particularly beneficial for organisms in fluctuating environmental conditions. This trait may also reflect a specific evolutionary adaptation that enables Clostridium sp. AF35-15 to thrive in its ecological niche. Understanding the genomic architecture of Clostridium sp. AF35-15 can provide insights into its biological functions and ecological roles. The presence of a single replicon may facilitate rapid adaptation to environmental changes, which is an important consideration in microbial ecology. Such adaptability can play a significant role in the organism's interactions with surrounding microbial communities and its contribution to biogeochemical cycles. In summary, the genomic simplicity of Clostridium sp. AF35-15, as evidenced by its single replicon, underscores its potential for resilience and adaptability within its ecosystem, emphasizing the intricate balance of microbial life and its responses to environmental factors.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF35-15
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF35-15 AF35-15.Scaf31, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2748 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acrb/acrd/acrf family proteinDWZ76_13290Not AvailableNegative2870468 - 2873518110980.0
efflux rnd transporter periplasmic adaptor subunitDWZ76_13295Not AvailableNegative2873515 - 287463940020.8
tetr family transcriptional regulatorDWZ76_13300Not AvailableNegative2874939 - 287557124882.3
potassium/proton antiporterDWZ76_13305Not AvailableNegative2875754 - 287743360437.6
duf1576 domain-containing proteinDWZ76_13310Not AvailableNegative2877535 - 287881545892.3
shikimate kinaseDWZ76_13315Not AvailableNegative2879012 - 287954819745.8
flavin reductase family proteinDWZ76_13320Not AvailableNegative2879538 - 288023025386.3
type ii toxin-antitoxin system hicb family antitoxinDWZ76_13325Not AvailableNegative2880243 - 288051810227.9
putative manganese-dependent inorganic diphosphataseDWZ76_13330Not AvailableNegative2880613 - 288227761151.0
rok family proteinDWZ76_13335Not AvailableNegative2882684 - 288362833205.0

Displaying genes 2571 – 2580 of 2869 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.