Clostridium sp. AF35-15

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF35-15 is characterized by having a single replicon, indicating a streamlined genomic structure that may influence its adaptability and metabolic efficiency. The organism is cataloged under the accession number QUDY00000000.1, which allows for its identification and reference in various scientific databases. The simplicity of possessing one replicon may suggest potential advantages in terms of gene regulation and replication processes, which can be particularly beneficial for organisms in fluctuating environmental conditions. This trait may also reflect a specific evolutionary adaptation that enables Clostridium sp. AF35-15 to thrive in its ecological niche. Understanding the genomic architecture of Clostridium sp. AF35-15 can provide insights into its biological functions and ecological roles. The presence of a single replicon may facilitate rapid adaptation to environmental changes, which is an important consideration in microbial ecology. Such adaptability can play a significant role in the organism's interactions with surrounding microbial communities and its contribution to biogeochemical cycles. In summary, the genomic simplicity of Clostridium sp. AF35-15, as evidenced by its single replicon, underscores its potential for resilience and adaptability within its ecosystem, emphasizing the intricate balance of microbial life and its responses to environmental factors.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF35-15
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF35-15 AF35-15.Scaf31, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2748 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorDWZ76_11595Not AvailableNegative2502719 - 250364234705.9
rna polymerase subunit sigma-70DWZ76_11600Not AvailablePositive2503782 - 250433620724.6
histidine phosphatase family proteinDWZ76_11605Not AvailablePositive2504343 - 250496923461.0
phosphoribosylformylglycinamidine synthaseDWZ76_11610Not AvailablePositive2505139 - 2508903138727.0
hypothetical proteinDWZ76_11615Not AvailablePositive2509282 - 251038540883.0
duf3783 domain-containing proteinDWZ76_11620Not AvailablePositive2510649 - 251114918674.6
polyphosphate:amp phosphotransferaseDWZ76_11625Not AvailablePositive2511202 - 251271059717.4
voc family proteinDWZ76_11630Not AvailablePositive2512955 - 251330513287.8
nad(p)/fad-dependent oxidoreductaseDWZ76_11635Not AvailablePositive2513343 - 251460845867.2
(d)cmp kinaseDWZ76_11640Not AvailablePositive2514632 - 251530925005.8

Displaying genes 2241 – 2250 of 2869 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.