Clostridium sp. AF35-15

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF35-15 is characterized by having a single replicon, indicating a streamlined genomic structure that may influence its adaptability and metabolic efficiency. The organism is cataloged under the accession number QUDY00000000.1, which allows for its identification and reference in various scientific databases. The simplicity of possessing one replicon may suggest potential advantages in terms of gene regulation and replication processes, which can be particularly beneficial for organisms in fluctuating environmental conditions. This trait may also reflect a specific evolutionary adaptation that enables Clostridium sp. AF35-15 to thrive in its ecological niche. Understanding the genomic architecture of Clostridium sp. AF35-15 can provide insights into its biological functions and ecological roles. The presence of a single replicon may facilitate rapid adaptation to environmental changes, which is an important consideration in microbial ecology. Such adaptability can play a significant role in the organism's interactions with surrounding microbial communities and its contribution to biogeochemical cycles. In summary, the genomic simplicity of Clostridium sp. AF35-15, as evidenced by its single replicon, underscores its potential for resilience and adaptability within its ecosystem, emphasizing the intricate balance of microbial life and its responses to environmental factors.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF35-15
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF35-15 AF35-15.Scaf31, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2748 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate kinaseDWZ76_09680Not AvailablePositive2098700 - 209947929914.2
shikimate dehydrogenaseDWZ76_09685Not AvailablePositive2099528 - 210039731327.8
atp-dependent chaperone clpbDWZ76_09690Not AvailablePositive2100599 - 210319096332.5
ribose 5-phosphate isomerase bDWZ76_09695Not AvailablePositive2103401 - 210384415858.1
fpra family a-type flavoproteinDWZ76_09700Not AvailablePositive2103974 - 210512242685.4
serine hydroxymethyltransferaseDWZ76_09705Not AvailablePositive2105273 - 210652045359.7
ornithine cyclodeaminase family proteinDWZ76_09710Not AvailableNegative2106677 - 210770238307.3
duf1622 domain-containing proteinDWZ76_09715Not AvailablePositive2107941 - 210830013573.1
luxr family transcriptional regulatorDWZ76_09720Not AvailableNegative2108365 - 210947443517.6
proline racemaseDWZ76_09725Not AvailablePositive2109873 - 211088036614.3

Displaying genes 1891 – 1900 of 2869 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.