Clostridium sp. AF35-15

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF35-15 is characterized by having a single replicon, indicating a streamlined genomic structure that may influence its adaptability and metabolic efficiency. The organism is cataloged under the accession number QUDY00000000.1, which allows for its identification and reference in various scientific databases. The simplicity of possessing one replicon may suggest potential advantages in terms of gene regulation and replication processes, which can be particularly beneficial for organisms in fluctuating environmental conditions. This trait may also reflect a specific evolutionary adaptation that enables Clostridium sp. AF35-15 to thrive in its ecological niche. Understanding the genomic architecture of Clostridium sp. AF35-15 can provide insights into its biological functions and ecological roles. The presence of a single replicon may facilitate rapid adaptation to environmental changes, which is an important consideration in microbial ecology. Such adaptability can play a significant role in the organism's interactions with surrounding microbial communities and its contribution to biogeochemical cycles. In summary, the genomic simplicity of Clostridium sp. AF35-15, as evidenced by its single replicon, underscores its potential for resilience and adaptability within its ecosystem, emphasizing the intricate balance of microbial life and its responses to environmental factors.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF35-15
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF35-15 AF35-15.Scaf31, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2748 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lactonase family proteinDWZ76_09580Not AvailablePositive2077525 - 207860139740.3
chorismate synthaseDWZ76_09585Not AvailablePositive2078627 - 207973039200.5
tigr01440 family proteinDWZ76_09590Not AvailablePositive2079822 - 208041220956.2
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdDWZ76_09595Not AvailablePositive2080443 - 208186153371.8
nyn domain-containing proteinDWZ76_09600Not AvailablePositive2082266 - 208313232563.6
endonuclease iiiDWZ76_09605Not AvailablePositive2083292 - 208393023395.6
cpbp family intramembrane metalloproteaseDWZ76_09610Not AvailablePositive2083947 - 208483733509.3
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDWZ76_09615Not AvailablePositive2084913 - 208596839392.6
ykgj family cysteine cluster proteinDWZ76_09620Not AvailablePositive2085971 - 208671428835.6
php domain-containing proteinDWZ76_09625Not AvailablePositive2086810 - 208762530374.0

Displaying genes 1871 – 1880 of 2869 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.