Clostridium sp. AF36-18BH

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF36-18BH is characterized by having a single replicon, indicating that its genetic material is organized on a single circular chromosome. This trait is common among members of the Clostridium genus, which are known for their anaerobic metabolism and ability to thrive in oxygen-free environments. The genome of Clostridium sp. AF36-18BH is represented in the sequence database under the accession number QUDU00000000.1. This accession provides a reference point for researchers seeking genomic information about this strain, facilitating studies related to its biology and potential applications. While specific phenotypic characteristics or ecological roles of Clostridium sp. AF36-18BH are not provided, it is essential to recognize that species within the Clostridium genus often play significant roles in various ecosystems, particularly in the decomposition of organic matter. Their anaerobic metabolic pathways contribute to nutrient cycling, especially in soil and gut environments. In summary, Clostridium sp. AF36-18BH, with its single replicon structure and genomic representation, exemplifies the unique genomic organization found in the Clostridium genus. Understanding its genetic framework may offer insights into its ecological roles and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF36-18BH
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF36-18BH AF36-18BH.Scaf77, whole genome shotgun

Gene Summary

Adenine Count

1108145 bp

Thymine Count

1102524 bp

Guanine Count

956920 bp

Cytosine Count

945990 bp

Genome Length

4114008 bp

Protein-coding Genes

3714 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDWZ96_04700Not AvailableNegative1001799 - 100331656179.5
hypothetical proteinDWZ96_04705Not AvailablePositive1003474 - 100562180909.8
hypothetical proteinDWZ96_04710Not AvailableNegative1005611 - 100628824142.8
single-stranded-dna-specific exonuclease recjDWZ96_04715Not AvailableNegative1006926 - 100868965384.7
rpn family recombination-promoting nuclease/putative transposaseDWZ96_04720Not AvailablePositive1008903 - 100974232075.4
protein translocase subunit secdDWZ96_04725Not AvailableNegative1009819 - 101208080802.4
thioether cross-link-forming sciff peptide maturaseDWZ96_04730Not AvailableNegative1012097 - 101349452644.9
six-cysteine peptide sciffDWZ96_04735Not AvailableNegative1013774 - 10139175112.24
tigr04086 family membrane proteinDWZ96_04740Not AvailableNegative1014076 - 101445613427.2
hlyc/corc family transporterDWZ96_04745Not AvailablePositive1014605 - 101590348680.4

Displaying genes 911 – 920 of 3778 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.