Clostridium sp. AF37-5

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF37-5 is characterized by having a single replicon, which is a notable trait for its genomic organization. The organism is cataloged under the accession QUDR00000000.1, indicating its sequence data is available for further analysis and study. The presence of a single replicon suggests a streamlined genomic structure, which may have implications for its metabolic processes and adaptability in various environments. Clostridia are known for their diverse metabolic capabilities, including fermentation processes, which may play a significant role in the organism's ecological interactions. Understanding the genetic composition of Clostridium sp. AF37-5 can provide insights into its potential applications, particularly in biotechnological fields such as biofuel production or bioremediation. The organism's ability to thrive in anaerobic conditions is consistent with the broader traits of the Clostridium genus, which includes species that are important in nutrient cycling and decomposition within their ecosystems. In summary, Clostridium sp. AF37-5, with its single replicon and available genomic data, represents a potential subject of interest for further research into its ecological roles and applications in biotechnology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF37-5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF37-5 AF37-5.Scaf64, whole genome shotgun

Gene Summary

Adenine Count

935210 bp

Thymine Count

920591 bp

Guanine Count

638718 bp

Cytosine Count

613162 bp

Genome Length

3107801 bp

Protein-coding Genes

2829 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinDW019_06955Not AvailablePositive1448914 - 144924612812.3
type ii toxin-antitoxin system hipa family toxinDW019_06960Not AvailablePositive1449246 - 145054449332.1
50s ribosomal protein l25DW019_06965Not AvailablePositive1450704 - 145128221878.2
transcriptional regulatorDW019_06970Not AvailableNegative1451352 - 14515647945.64
hypothetical proteinDW019_06975Not AvailableNegative1451565 - 145196915168.0
nudix domain-containing proteinDW019_06980Not AvailablePositive1452122 - 145260418644.2
diaminopimelate dehydrogenaseDW019_06985Not AvailablePositive1452701 - 145368136034.5
hypothetical proteinDW019_06990Not AvailableNegative1453753 - 145405511228.9
duf3892 domain-containing proteinDW019_06995Not AvailablePositive1454180 - 145447310243.2
citrate transporterDW019_07000Not AvailableNegative1454448 - 145550039192.4

Displaying genes 1371 – 1380 of 2888 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.