Clostridiaceae bacterium AF42-6

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Description

Clostridiaceae bacterium AF42-6 is a member of the Clostridiaceae family, characterized by a single replicon, which indicates that it has a streamlined genomic structure. Its genomic data is available under the accession number QUDN00000000.1. This bacterium is part of a larger group known for diverse metabolic capabilities, often inhabiting anaerobic environments. While specific metabolic pathways and ecological roles of Clostridiaceae bacterium AF42-6 have not been detailed in the provided information, members of the Clostridiaceae family are generally recognized for their ability to ferment various substrates, contributing to carbon cycling in their ecosystems. The presence of a single replicon suggests that Clostridiaceae bacterium AF42-6 may exhibit specific advantages in its adaptation to anaerobic environments, potentially leading to efficient resource utilization. The streamlined genome can be an indicator of specialized ecological niches, allowing the organism to thrive in particular habitats where competition for resources is present. In summary, Clostridiaceae bacterium AF42-6, with its single replicon and specified genomic data, reflects the adaptability and ecological significance of the Clostridiaceae family in anaerobic environments, underscoring the role of such bacteria in ecosystem processes like fermentation and nutrient cycling.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridiaceae bacterium AF42-6 AF42-6.Scaf115, whole genome

Gene Summary

Adenine Count

930385 bp

Thymine Count

974586 bp

Guanine Count

731864 bp

Cytosine Count

810355 bp

Genome Length

3447190 bp

Protein-coding Genes

3081 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium:calcium antiporterDW058_16850Not AvailablePositive3278999 - 327992533085.9
hypothetical proteinDW058_16855Not AvailablePositive3280329 - 328159146945.2
hypothetical proteinDW058_16860Not AvailablePositive3281762 - 328259732393.1
conjugal transfer proteinDW058_16865Not AvailablePositive3282598 - 328415860992.7
hypothetical proteinDW058_16870Not AvailablePositive3284136 - 328484326899.4
abc transporter permeaseDW058_16875Not AvailableNegative3285039 - 328736686434.9
abc transporter atp-binding proteinDW058_16880Not AvailableNegative3287381 - 328804624279.2
sensor histidine kinaseDW058_16885Not AvailableNegative3288198 - 328922938985.5
dna-binding response regulatorDW058_16890Not AvailableNegative3289226 - 328999629071.1
toxin-antitoxin system proteinDW058_16895Not AvailableNegative3290165 - 32904049199.7

Displaying genes 3011 – 3020 of 3196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014202N-ButyrylglycineC6H11NO3Chemical structure of N-ButyrylglycineNULL
Average145.1564Da
Monoisotopic145.073893223Da
BASm00142924-Androsten-3beta,17beta-diol monosulfateC19H30O6SChemical structure of 4-Androsten-3beta,17beta-diol monosulfateNULL
Average386.5Da
Monoisotopic386.17740702Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.