Clostridiaceae bacterium AF42-6

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Description

Clostridiaceae bacterium AF42-6 is a member of the Clostridiaceae family, characterized by a single replicon, which indicates that it has a streamlined genomic structure. Its genomic data is available under the accession number QUDN00000000.1. This bacterium is part of a larger group known for diverse metabolic capabilities, often inhabiting anaerobic environments. While specific metabolic pathways and ecological roles of Clostridiaceae bacterium AF42-6 have not been detailed in the provided information, members of the Clostridiaceae family are generally recognized for their ability to ferment various substrates, contributing to carbon cycling in their ecosystems. The presence of a single replicon suggests that Clostridiaceae bacterium AF42-6 may exhibit specific advantages in its adaptation to anaerobic environments, potentially leading to efficient resource utilization. The streamlined genome can be an indicator of specialized ecological niches, allowing the organism to thrive in particular habitats where competition for resources is present. In summary, Clostridiaceae bacterium AF42-6, with its single replicon and specified genomic data, reflects the adaptability and ecological significance of the Clostridiaceae family in anaerobic environments, underscoring the role of such bacteria in ecosystem processes like fermentation and nutrient cycling.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridiaceae bacterium AF42-6 AF42-6.Scaf115, whole genome

Gene Summary

Adenine Count

930385 bp

Thymine Count

974586 bp

Guanine Count

731864 bp

Cytosine Count

810355 bp

Genome Length

3447190 bp

Protein-coding Genes

3081 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-tetrahydrodipicolinate synthaseDW058_16725Not AvailableNegative3258311 - 325919832145.8
sis domain-containing proteinDW058_16730Not AvailableNegative3259204 - 325981521665.2
pts sugar transporter subunit iicDW058_16740Not AvailableNegative3260650 - 326193645324.5
pts sugar transporter subunit iibDW058_16745Not AvailableNegative3262007 - 326228510133.5
pts sugar transporter subunit iiaDW058_16750Not AvailableNegative3262322 - 326276216100.0
hypothetical proteinDW058_16755Not AvailableNegative3263026 - 32632568870.47
class i sam-dependent rrna methyltransferaseDW058_16765Not AvailableNegative3263929 - 326513145293.3
small, acid-soluble spore protein, alpha/beta typeDW058_16775Not AvailablePositive3265547 - 32657477580.09
xre family transcriptional regulatorDW058_16780Not AvailableNegative3265799 - 326647625722.2
peptidase s8DW058_16785Not AvailablePositive3266595 - 326828361026.1

Displaying genes 2991 – 3000 of 3196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014202N-ButyrylglycineC6H11NO3Chemical structure of N-ButyrylglycineNULL
Average145.1564Da
Monoisotopic145.073893223Da
BASm00142924-Androsten-3beta,17beta-diol monosulfateC19H30O6SChemical structure of 4-Androsten-3beta,17beta-diol monosulfateNULL
Average386.5Da
Monoisotopic386.17740702Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.