Clostridiaceae bacterium AF42-6

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Description

Clostridiaceae bacterium AF42-6 is a member of the Clostridiaceae family, characterized by a single replicon, which indicates that it has a streamlined genomic structure. Its genomic data is available under the accession number QUDN00000000.1. This bacterium is part of a larger group known for diverse metabolic capabilities, often inhabiting anaerobic environments. While specific metabolic pathways and ecological roles of Clostridiaceae bacterium AF42-6 have not been detailed in the provided information, members of the Clostridiaceae family are generally recognized for their ability to ferment various substrates, contributing to carbon cycling in their ecosystems. The presence of a single replicon suggests that Clostridiaceae bacterium AF42-6 may exhibit specific advantages in its adaptation to anaerobic environments, potentially leading to efficient resource utilization. The streamlined genome can be an indicator of specialized ecological niches, allowing the organism to thrive in particular habitats where competition for resources is present. In summary, Clostridiaceae bacterium AF42-6, with its single replicon and specified genomic data, reflects the adaptability and ecological significance of the Clostridiaceae family in anaerobic environments, underscoring the role of such bacteria in ecosystem processes like fermentation and nutrient cycling.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridiaceae bacterium AF42-6 AF42-6.Scaf115, whole genome

Gene Summary

Adenine Count

930385 bp

Thymine Count

974586 bp

Guanine Count

731864 bp

Cytosine Count

810355 bp

Genome Length

3447190 bp

Protein-coding Genes

3081 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deor/glpr transcriptional regulatorDW058_11700Not AvailableNegative2292382 - 229314328466.8
ribulose-phosphate 3-epimeraseDW058_11705Not AvailableNegative2293196 - 229383723976.0
sdr family nad(p)-dependent oxidoreductaseDW058_11710Not AvailableNegative2293854 - 229464228771.1
sgcq proteinDW058_11715Not AvailableNegative2294655 - 229545829366.4
hypothetical proteinDW058_11720Not AvailableNegative2295480 - 229681748250.1
pts galactitol transporter subunit iibDW058_11725Not AvailableNegative2296821 - 229710510114.4
m42 family peptidaseDW058_11730Not AvailableNegative2297102 - 229819340801.7
pts sugar transporter subunit iiaDW058_11735Not AvailableNegative2298187 - 229865118122.1
Trna-serNot AvailableNot AvailablePositive2299089 - 2299177Not Available
Trna-serNot AvailableNot AvailablePositive2299234 - 2299319Not Available

Displaying genes 2101 – 2110 of 3196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014202N-ButyrylglycineC6H11NO3Chemical structure of N-ButyrylglycineNULL
Average145.1564Da
Monoisotopic145.073893223Da
BASm00142924-Androsten-3beta,17beta-diol monosulfateC19H30O6SChemical structure of 4-Androsten-3beta,17beta-diol monosulfateNULL
Average386.5Da
Monoisotopic386.17740702Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.