Clostridiaceae bacterium AF42-6

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Description

Clostridiaceae bacterium AF42-6 is a member of the Clostridiaceae family, characterized by a single replicon, which indicates that it has a streamlined genomic structure. Its genomic data is available under the accession number QUDN00000000.1. This bacterium is part of a larger group known for diverse metabolic capabilities, often inhabiting anaerobic environments. While specific metabolic pathways and ecological roles of Clostridiaceae bacterium AF42-6 have not been detailed in the provided information, members of the Clostridiaceae family are generally recognized for their ability to ferment various substrates, contributing to carbon cycling in their ecosystems. The presence of a single replicon suggests that Clostridiaceae bacterium AF42-6 may exhibit specific advantages in its adaptation to anaerobic environments, potentially leading to efficient resource utilization. The streamlined genome can be an indicator of specialized ecological niches, allowing the organism to thrive in particular habitats where competition for resources is present. In summary, Clostridiaceae bacterium AF42-6, with its single replicon and specified genomic data, reflects the adaptability and ecological significance of the Clostridiaceae family in anaerobic environments, underscoring the role of such bacteria in ecosystem processes like fermentation and nutrient cycling.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridiaceae bacterium AF42-6 AF42-6.Scaf115, whole genome

Gene Summary

Adenine Count

930385 bp

Thymine Count

974586 bp

Guanine Count

731864 bp

Cytosine Count

810355 bp

Genome Length

3447190 bp

Protein-coding Genes

3081 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDW058_00205Not AvailableNegative42138 - 423659056.51
moxr family atpaseDW058_00215Not AvailableNegative44157 - 4507434538.4
radical sam proteinDW058_00220Not AvailableNegative45097 - 4624244242.4
stage ii sporulation protein pDW058_00230Not AvailableNegative48170 - 4940545997.9
gpr endopeptidaseDW058_00235Not AvailableNegative49562 - 5043131511.1
30s ribosomal protein s20DW058_00240Not AvailablePositive50672 - 509209107.26
dna polymerase iii subunit deltaDW058_00245Not AvailableNegative51034 - 5202637985.3
aminoacyl-histidine dipeptidaseDW058_00250Not AvailableNegative52037 - 5348253019.4
pqqd family proteinDW058_00255Not AvailableNegative53612 - 5395613516.2
dna internalization-related competence protein comec/rec2DW058_00265Not AvailableNegative55982 - 5814780685.1

Displaying genes 121 – 130 of 3196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014202N-ButyrylglycineC6H11NO3Chemical structure of N-ButyrylglycineNULL
Average145.1564Da
Monoisotopic145.073893223Da
BASm00142924-Androsten-3beta,17beta-diol monosulfateC19H30O6SChemical structure of 4-Androsten-3beta,17beta-diol monosulfateNULL
Average386.5Da
Monoisotopic386.17740702Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.