Clostridiaceae bacterium AF42-6

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Description

Clostridiaceae bacterium AF42-6 is a member of the Clostridiaceae family, characterized by a single replicon, which indicates that it has a streamlined genomic structure. Its genomic data is available under the accession number QUDN00000000.1. This bacterium is part of a larger group known for diverse metabolic capabilities, often inhabiting anaerobic environments. While specific metabolic pathways and ecological roles of Clostridiaceae bacterium AF42-6 have not been detailed in the provided information, members of the Clostridiaceae family are generally recognized for their ability to ferment various substrates, contributing to carbon cycling in their ecosystems. The presence of a single replicon suggests that Clostridiaceae bacterium AF42-6 may exhibit specific advantages in its adaptation to anaerobic environments, potentially leading to efficient resource utilization. The streamlined genome can be an indicator of specialized ecological niches, allowing the organism to thrive in particular habitats where competition for resources is present. In summary, Clostridiaceae bacterium AF42-6, with its single replicon and specified genomic data, reflects the adaptability and ecological significance of the Clostridiaceae family in anaerobic environments, underscoring the role of such bacteria in ecosystem processes like fermentation and nutrient cycling.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridiaceae bacterium AF42-6 AF42-6.Scaf115, whole genome

Gene Summary

Adenine Count

930385 bp

Thymine Count

974586 bp

Guanine Count

731864 bp

Cytosine Count

810355 bp

Genome Length

3447190 bp

Protein-coding Genes

3081 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaDW058_06560Not AvailablePositive1281017 - 128238751719.0
dna polymerase iii subunit betaDW058_06565Not AvailablePositive1282694 - 128380641918.5
rna-binding s4 domain-containing proteinDW058_06570Not AvailablePositive1283819 - 12840287636.17
dna replication/repair protein recfDW058_06575Not AvailablePositive1284044 - 128514742137.4
dna topoisomerase (atp-hydrolyzing) subunit bDW058_06580Not AvailablePositive1285144 - 128706071657.3
dna gyrase subunit aDW058_06585Not AvailablePositive1287080 - 128958793975.3
1-acyl-sn-glycerol-3-phosphate acyltransferaseDW058_06590Not AvailablePositive1289559 - 129030228104.8
Trna-serNot AvailableNot AvailablePositive1290309 - 1290396Not Available
duf2284 domain-containing proteinDW058_06605Not AvailablePositive1290935 - 129140517225.7
tigr00730 family rossman fold proteinDW058_06610Not AvailableNegative1291420 - 129195319040.1

Displaying genes 1191 – 1200 of 3196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014202N-ButyrylglycineC6H11NO3Chemical structure of N-ButyrylglycineNULL
Average145.1564Da
Monoisotopic145.073893223Da
BASm00142924-Androsten-3beta,17beta-diol monosulfateC19H30O6SChemical structure of 4-Androsten-3beta,17beta-diol monosulfateNULL
Average386.5Da
Monoisotopic386.17740702Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.