Ruminococcus sp. AF42-9BH

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF42-9BH is a Gram-positive bacterium characterized by its cocci shape. This microorganism possesses the capability to produce flagella, which may contribute to its motility in various environments. It has been documented to contain a single replicon, indicating a streamlined genetic structure that could facilitate efficient replication under suitable conditions. The accession number for Ruminococcus sp. AF42-9BH is QUDM00000000.1, which allows for its identification and retrieval in genomic databases, facilitating further research into its characteristics and potential applications. From a biological perspective, the presence of flagella suggests that Ruminococcus sp. AF42-9BH may be adapted to specific ecological niches where motility is advantageous, such as in complex environments like the gastrointestinal tracts of ruminants. This could imply a role in the digestive processes or microbial interactions within those ecosystems. Understanding the ecological role of such microorganisms is essential, as they may contribute to nutrient cycling and the overall health of their host organisms.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF42-9BH
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF42-9BH
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF42-9BH AF42-9BH.Scaf327, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3932 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l20DW061_00320Not AvailablePositive72278 - 7263413141.4
amino acid abc transporter substrate-binding proteinDW061_00325Not AvailablePositive73158 - 7431240708.4
branched-chain amino acid abc transporter permeaseDW061_00330Not AvailablePositive74562 - 7544930169.4
branched-chain amino acid abc transporter permeaseDW061_00335Not AvailablePositive75460 - 7651537917.2
abc transporter atp-binding proteinDW061_00340Not AvailablePositive76519 - 7727728144.2
abc transporter atp-binding proteinDW061_00345Not AvailablePositive77290 - 7800025837.5
cytidylate kinase-like family proteinDW061_00350Not AvailablePositive78015 - 7863823390.1
duf4364 family proteinDW061_00360Not AvailableNegative80083 - 8059519825.6
tigr01212 family radical sam proteinDW061_00365Not AvailableNegative80656 - 8160335933.4
duf624 domain-containing proteinDW061_00370Not AvailableNegative81600 - 8239129621.6

Displaying genes 91 – 100 of 4019 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.