Ruminococcus sp. AM12-48

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM12-48 is a Gram-positive bacterium characterized by its cocci shape. This species is notable for the presence of flagella, which contributes to its motility. It possesses a single replicon, indicating a streamlined genomic organization that can facilitate efficient replication and adaptation within its ecological niche. The accession number for Ruminococcus sp. AM12-48 is QUDA00000000.1, providing a reference for genomic and taxonomic data. This species is part of the Ruminococcus genus, which is known for its role in the fermentation of complex carbohydrates in the gastrointestinal tract of various animals, particularly herbivores. The presence of flagella suggests that Ruminococcus sp. AM12-48 may have the ability to navigate its environment, which could be advantageous for colonization in the digestive systems where it may play a role in breaking down plant materials. The ecological significance of Ruminococcus species often lies in their contributions to the gut microbiome, where they assist in the digestion of fibrous substrates, thereby supporting the host's nutrient absorption and overall health. In summary, Ruminococcus sp. AM12-48 exhibits key traits such as being Gram-positive, cocci-shaped, and motile, with a single replicon. These characteristics may enhance its functionality in the complex ecosystem of the gut, highlighting its potential importance in microbial fermentation processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM12-48
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM12-48
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM12-48 AM12-48.Scaf87, whole genome shotgun

Gene Summary

Adenine Count

1211207 bp

Thymine Count

1230666 bp

Guanine Count

840806 bp

Cytosine Count

865624 bp

Genome Length

4148882 bp

Protein-coding Genes

3662 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfurtransferase-like selenium metabolism protein yedfDW141_00420Not AvailablePositive76819 - 7743322466.3
dicarboxylate/amino acid:cation symporterDW141_00425Not AvailableNegative77491 - 7870242982.2
xdhc and coxi family proteinDW141_00430Not AvailablePositive78785 - 7978036691.0
sh3 domain-containing proteinDW141_00435Not AvailablePositive80096 - 8057816469.7
s-ribosylhomocysteine lyaseDW141_00440Not AvailableNegative80797 - 8127618170.9
peptidylprolyl isomeraseDW141_00445Not AvailablePositive81514 - 8233228819.4
methyltransferase domain-containing proteinDW141_00450Not AvailableNegative82454 - 8301720788.8
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcDW141_00455Not AvailablePositive83475 - 8468643922.3
type iii pantothenate kinaseDW141_00460Not AvailablePositive84724 - 8548827105.5
rlua family pseudouridine synthaseDW141_00465Not AvailableNegative85582 - 8648133783.9

Displaying genes 81 – 90 of 3712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.