Ruminococcus sp. AM12-48

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM12-48 is a Gram-positive bacterium characterized by its cocci shape. This species is notable for the presence of flagella, which contributes to its motility. It possesses a single replicon, indicating a streamlined genomic organization that can facilitate efficient replication and adaptation within its ecological niche. The accession number for Ruminococcus sp. AM12-48 is QUDA00000000.1, providing a reference for genomic and taxonomic data. This species is part of the Ruminococcus genus, which is known for its role in the fermentation of complex carbohydrates in the gastrointestinal tract of various animals, particularly herbivores. The presence of flagella suggests that Ruminococcus sp. AM12-48 may have the ability to navigate its environment, which could be advantageous for colonization in the digestive systems where it may play a role in breaking down plant materials. The ecological significance of Ruminococcus species often lies in their contributions to the gut microbiome, where they assist in the digestion of fibrous substrates, thereby supporting the host's nutrient absorption and overall health. In summary, Ruminococcus sp. AM12-48 exhibits key traits such as being Gram-positive, cocci-shaped, and motile, with a single replicon. These characteristics may enhance its functionality in the complex ecosystem of the gut, highlighting its potential importance in microbial fermentation processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM12-48
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM12-48
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM12-48 AM12-48.Scaf87, whole genome shotgun

Gene Summary

Adenine Count

1211207 bp

Thymine Count

1230666 bp

Guanine Count

840806 bp

Cytosine Count

865624 bp

Genome Length

4148882 bp

Protein-coding Genes

3662 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
guanylate kinaseDW141_13930Not AvailableNegative2984422 - 298500922723.8
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDW141_13935Not AvailableNegative2985020 - 298648655005.4
dna-binding response regulatorDW141_13940Not AvailableNegative2986776 - 298746526525.9
sensor histidine kinaseDW141_13945Not AvailableNegative2987462 - 298860442993.0
methionine adenosyltransferaseDW141_13950Not AvailableNegative2988842 - 299002343197.3
udp-n-acetylglucosamine 1-carboxyvinyltransferaseDW141_13955Not AvailableNegative2990386 - 299167846157.8
shikimate kinaseDW141_13960Not AvailableNegative2991895 - 299240719056.1
flavin reductase family proteinDW141_13965Not AvailableNegative2992459 - 299304921975.8
putative manganese-dependent inorganic diphosphataseDW141_13970Not AvailableNegative2993084 - 299475462651.7
s1 rna-binding domain-containing proteinDW141_13975Not AvailableNegative2994768 - 299567633084.5

Displaying genes 2671 – 2680 of 3712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.